Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tcof1O08784 Gm18049-201ENSMUST00000208909 581 ntBASIC17.09■□□□□ 0.33
Tcof1O08784 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tcof1O08784 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tcof1O08784 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Tcof1O08784 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tcof1O08784 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Tcof1O08784 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tcof1O08784 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.08■□□□□ 0.33
Tcof1O08784 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Tcof1O08784 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tcof1O08784 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tcof1O08784 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tcof1O08784 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Tcof1O08784 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Tcof1O08784 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tcof1O08784 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tcof1O08784 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tcof1O08784 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tcof1O08784 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Tcof1O08784 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tcof1O08784 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tcof1O08784 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.33
Tcof1O08784 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tcof1O08784 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tcof1O08784 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tcof1O08784 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tcof1O08784 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tcof1O08784 Gm38294-201ENSMUST00000192831 381 ntBASIC17.08■□□□□ 0.32
Tcof1O08784 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Tcof1O08784 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tcof1O08784 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.08■□□□□ 0.32
Tcof1O08784 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tcof1O08784 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tcof1O08784 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tcof1O08784 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tcof1O08784 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tcof1O08784 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tcof1O08784 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tcof1O08784 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tcof1O08784 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tcof1O08784 Carlr-201ENSMUST00000181515 2574 ntBASIC17.08■□□□□ 0.32
Tcof1O08784 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tcof1O08784 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Tcof1O08784 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tcof1O08784 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tcof1O08784 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tcof1O08784 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tcof1O08784 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Tcof1O08784 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tcof1O08784 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Tcof1O08784 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tcof1O08784 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Tcof1O08784 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Tcof1O08784 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tcof1O08784 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tcof1O08784 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tcof1O08784 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.07■□□□□ 0.32
Tcof1O08784 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.07■□□□□ 0.32
Tcof1O08784 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tcof1O08784 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tcof1O08784 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tcof1O08784 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tcof1O08784 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tcof1O08784 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tcof1O08784 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tcof1O08784 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Tcof1O08784 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tcof1O08784 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tcof1O08784 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.06■□□□□ 0.32
Tcof1O08784 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tcof1O08784 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tcof1O08784 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tcof1O08784 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tcof1O08784 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.06■□□□□ 0.32
Tcof1O08784 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.06■□□□□ 0.32
Tcof1O08784 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tcof1O08784 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tcof1O08784 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tcof1O08784 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tcof1O08784 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tcof1O08784 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tcof1O08784 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tcof1O08784 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.06■□□□□ 0.32
Tcof1O08784 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tcof1O08784 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tcof1O08784 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tcof1O08784 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tcof1O08784 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Tcof1O08784 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tcof1O08784 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Tcof1O08784 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tcof1O08784 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tcof1O08784 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tcof1O08784 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.05■□□□□ 0.32
Tcof1O08784 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tcof1O08784 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tcof1O08784 Gm13823-201ENSMUST00000119930 345 ntBASIC17.05■□□□□ 0.32
Tcof1O08784 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tcof1O08784 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms