Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12-1A0N8R1 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.21□□□□□ -0.45
Trav12-1A0N8R1 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12-1A0N8R1 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.21□□□□□ -0.45
Trav12-1A0N8R1 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.21□□□□□ -0.45
Trav12-1A0N8R1 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12-1A0N8R1 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trav12-1A0N8R1 Gm4899-201ENSMUST00000178708 719 ntBASIC12.21□□□□□ -0.45
Trav12-1A0N8R1 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12-1A0N8R1 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.21□□□□□ -0.45
Trav12-1A0N8R1 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12-1A0N8R1 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12-1A0N8R1 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12-1A0N8R1 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12-1A0N8R1 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav12-1A0N8R1 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.21□□□□□ -0.46
Trav12-1A0N8R1 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav12-1A0N8R1 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav12-1A0N8R1 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav12-1A0N8R1 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Trav12-1A0N8R1 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Trav12-1A0N8R1 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.21□□□□□ -0.46
Trav12-1A0N8R1 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Gm15173-201ENSMUST00000122049 433 ntBASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12-1A0N8R1 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Gm14042-201ENSMUST00000120139 833 ntBASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav12-1A0N8R1 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms