Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smco4Q9JIS3 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco4Q9JIS3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco4Q9JIS3 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Smco4Q9JIS3 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco4Q9JIS3 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco4Q9JIS3 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Smco4Q9JIS3 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Smco4Q9JIS3 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco4Q9JIS3 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco4Q9JIS3 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco4Q9JIS3 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco4Q9JIS3 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smco4Q9JIS3 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smco4Q9JIS3 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.76□□□□□ -0.53
Smco4Q9JIS3 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.76□□□□□ -0.53
Smco4Q9JIS3 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco4Q9JIS3 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco4Q9JIS3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smco4Q9JIS3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Smco4Q9JIS3 Gm43183-201ENSMUST00000200632 547 ntBASIC11.76□□□□□ -0.53
Smco4Q9JIS3 Gm18421-201ENSMUST00000204122 625 ntBASIC11.76□□□□□ -0.53
Smco4Q9JIS3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC11.76□□□□□ -0.53
Smco4Q9JIS3 Gm5874-201ENSMUST00000096101 508 ntBASIC11.76□□□□□ -0.53
Smco4Q9JIS3 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smco4Q9JIS3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco4Q9JIS3 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smco4Q9JIS3 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Smco4Q9JIS3 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco4Q9JIS3 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco4Q9JIS3 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco4Q9JIS3 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco4Q9JIS3 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco4Q9JIS3 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco4Q9JIS3 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco4Q9JIS3 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Smco4Q9JIS3 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco4Q9JIS3 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.75□□□□□ -0.53
Smco4Q9JIS3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco4Q9JIS3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco4Q9JIS3 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco4Q9JIS3 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.75□□□□□ -0.53
Smco4Q9JIS3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC11.75□□□□□ -0.53
Smco4Q9JIS3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco4Q9JIS3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC11.75□□□□□ -0.53
Smco4Q9JIS3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC11.75□□□□□ -0.53
Smco4Q9JIS3 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco4Q9JIS3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Smco4Q9JIS3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco4Q9JIS3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco4Q9JIS3 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco4Q9JIS3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smco4Q9JIS3 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco4Q9JIS3 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Smco4Q9JIS3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Smco4Q9JIS3 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco4Q9JIS3 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco4Q9JIS3 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.75□□□□□ -0.53
Smco4Q9JIS3 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smco4Q9JIS3 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco4Q9JIS3 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco4Q9JIS3 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco4Q9JIS3 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smco4Q9JIS3 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smco4Q9JIS3 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Gm12085-201ENSMUST00000119263 940 ntBASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Gm15442-201ENSMUST00000117905 1527 ntBASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms