Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 AC087499.1-201ENST00000418141 1075 ntBASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 AC112698.1-201ENST00000510299 916 ntBASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
POLR2J3Q9H1A7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
POLR2J3Q9H1A7 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
POLR2J3Q9H1A7 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
POLR2J3Q9H1A7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.27■□□□□ 0.2
POLR2J3Q9H1A7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
POLR2J3Q9H1A7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
POLR2J3Q9H1A7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
POLR2J3Q9H1A7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
POLR2J3Q9H1A7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
POLR2J3Q9H1A7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
POLR2J3Q9H1A7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
POLR2J3Q9H1A7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
POLR2J3Q9H1A7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
POLR2J3Q9H1A7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.27■□□□□ 0.2
POLR2J3Q9H1A7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
POLR2J3Q9H1A7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.27■□□□□ 0.2
POLR2J3Q9H1A7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
POLR2J3Q9H1A7 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.27■□□□□ 0.2
POLR2J3Q9H1A7 AL596275.1-201ENST00000423464 877 ntBASIC16.27■□□□□ 0.2
POLR2J3Q9H1A7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.27■□□□□ 0.2
POLR2J3Q9H1A7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.27■□□□□ 0.2
POLR2J3Q9H1A7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
POLR2J3Q9H1A7 AC004263.2-201ENST00000617183 678 ntBASIC16.27■□□□□ 0.2
POLR2J3Q9H1A7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.27■□□□□ 0.2
POLR2J3Q9H1A7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
POLR2J3Q9H1A7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
POLR2J3Q9H1A7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.27■□□□□ 0.19
POLR2J3Q9H1A7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
POLR2J3Q9H1A7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
POLR2J3Q9H1A7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
POLR2J3Q9H1A7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
POLR2J3Q9H1A7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
POLR2J3Q9H1A7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
POLR2J3Q9H1A7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
POLR2J3Q9H1A7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
POLR2J3Q9H1A7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 BX664615.1-201ENST00000443558 458 ntBASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
POLR2J3Q9H1A7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
POLR2J3Q9H1A7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.25■□□□□ 0.19
POLR2J3Q9H1A7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
POLR2J3Q9H1A7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
POLR2J3Q9H1A7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.25■□□□□ 0.19
POLR2J3Q9H1A7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
POLR2J3Q9H1A7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms