Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Snrnp48Q9D361 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.61□□□□□ -0.07
Snrnp48Q9D361 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Snrnp48Q9D361 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Snrnp48Q9D361 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Snrnp48Q9D361 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Snrnp48Q9D361 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Snrnp48Q9D361 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Snrnp48Q9D361 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Snrnp48Q9D361 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Snrnp48Q9D361 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Snrnp48Q9D361 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.61□□□□□ -0.07
Snrnp48Q9D361 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.61□□□□□ -0.07
Snrnp48Q9D361 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Snrnp48Q9D361 Gm20553-201ENSMUST00000204205 844 ntBASIC14.61□□□□□ -0.07
Snrnp48Q9D361 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Snrnp48Q9D361 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Snrnp48Q9D361 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Snrnp48Q9D361 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Snrnp48Q9D361 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Snrnp48Q9D361 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Snrnp48Q9D361 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Snrnp48Q9D361 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Snrnp48Q9D361 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp48Q9D361 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp48Q9D361 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp48Q9D361 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Snrnp48Q9D361 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp48Q9D361 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Snrnp48Q9D361 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp48Q9D361 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp48Q9D361 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp48Q9D361 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp48Q9D361 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp48Q9D361 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.6□□□□□ -0.07
Snrnp48Q9D361 Gm11543-201ENSMUST00000120758 370 ntBASIC14.6□□□□□ -0.07
Snrnp48Q9D361 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.6□□□□□ -0.07
Snrnp48Q9D361 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp48Q9D361 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp48Q9D361 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.6□□□□□ -0.07
Snrnp48Q9D361 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp48Q9D361 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.6□□□□□ -0.07
Snrnp48Q9D361 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp48Q9D361 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp48Q9D361 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp48Q9D361 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.6□□□□□ -0.07
Snrnp48Q9D361 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.6□□□□□ -0.07
Snrnp48Q9D361 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Snrnp48Q9D361 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Gm6973-201ENSMUST00000117080 721 ntBASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Gm5479-201ENSMUST00000160578 435 ntBASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Gm45098-201ENSMUST00000207179 657 ntBASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Snrnp48Q9D361 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Snrnp48Q9D361 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Snrnp48Q9D361 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Snrnp48Q9D361 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Snrnp48Q9D361 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Snrnp48Q9D361 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Snrnp48Q9D361 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Snrnp48Q9D361 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Snrnp48Q9D361 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Snrnp48Q9D361 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Snrnp48Q9D361 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.58□□□□□ -0.08
Snrnp48Q9D361 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Snrnp48Q9D361 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.58□□□□□ -0.08
Snrnp48Q9D361 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.58□□□□□ -0.08
Snrnp48Q9D361 Gm25911-201ENSMUST00000157621 56 ntBASIC14.58□□□□□ -0.08
Snrnp48Q9D361 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms