Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.18■□□□□ 0.18
Q9CYI0 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Q9CYI0 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Q9CYI0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Q9CYI0 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Q9CYI0 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Q9CYI0 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.17■□□□□ 0.18
Q9CYI0 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.17■□□□□ 0.18
Q9CYI0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Q9CYI0 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Q9CYI0 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Q9CYI0 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Q9CYI0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Q9CYI0 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Q9CYI0 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Q9CYI0 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.17■□□□□ 0.18
Q9CYI0 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Q9CYI0 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Q9CYI0 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Q9CYI0 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Q9CYI0 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Q9CYI0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Q9CYI0 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Q9CYI0 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Q9CYI0 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Q9CYI0 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Q9CYI0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Q9CYI0 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Q9CYI0 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Q9CYI0 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Q9CYI0 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Q9CYI0 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Q9CYI0 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Q9CYI0 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Q9CYI0 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Q9CYI0 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Q9CYI0 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Q9CYI0 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.16■□□□□ 0.18
Q9CYI0 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Q9CYI0 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Q9CYI0 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Q9CYI0 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Q9CYI0 Gm27618-201ENSMUST00000183671 60 ntBASIC16.16■□□□□ 0.18
Q9CYI0 Gm27306-201ENSMUST00000183970 107 ntBASIC16.16■□□□□ 0.18
Q9CYI0 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.16■□□□□ 0.18
Q9CYI0 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.16■□□□□ 0.18
Q9CYI0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Q9CYI0 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Q9CYI0 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Q9CYI0 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Q9CYI0 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Q9CYI0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Q9CYI0 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.16■□□□□ 0.18
Q9CYI0 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Q9CYI0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Q9CYI0 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Q9CYI0 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Q9CYI0 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Q9CYI0 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Q9CYI0 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Q9CYI0 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Q9CYI0 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Q9CYI0 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Q9CYI0 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Q9CYI0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Q9CYI0 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Q9CYI0 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Q9CYI0 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.15■□□□□ 0.18
Q9CYI0 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.15■□□□□ 0.18
Q9CYI0 Gm27321-201ENSMUST00000185021 205 ntBASIC16.15■□□□□ 0.18
Q9CYI0 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Q9CYI0 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Q9CYI0 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Q9CYI0 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Q9CYI0 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.15■□□□□ 0.18
Q9CYI0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Q9CYI0 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Q9CYI0 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Q9CYI0 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Q9CYI0 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Q9CYI0 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Q9CYI0 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.15■□□□□ 0.18
Q9CYI0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Q9CYI0 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
Q9CYI0 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Q9CYI0 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Q9CYI0 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Q9CYI0 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Q9CYI0 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Q9CYI0 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Q9CYI0 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Q9CYI0 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.14■□□□□ 0.17
Q9CYI0 Gm13015-201ENSMUST00000118674 204 ntBASIC16.14■□□□□ 0.17
Q9CYI0 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Q9CYI0 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.14■□□□□ 0.17
Q9CYI0 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Q9CYI0 Gm29541-201ENSMUST00000191351 678 ntBASIC16.14■□□□□ 0.17
Q9CYI0 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Q9CYI0 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Q9CYI0 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms