Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scrt1Q99M85 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.85□□□□□ -0.35
Scrt1Q99M85 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scrt1Q99M85 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scrt1Q99M85 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Scrt1Q99M85 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scrt1Q99M85 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Scrt1Q99M85 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scrt1Q99M85 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scrt1Q99M85 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scrt1Q99M85 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scrt1Q99M85 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scrt1Q99M85 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scrt1Q99M85 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scrt1Q99M85 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scrt1Q99M85 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scrt1Q99M85 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scrt1Q99M85 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.84□□□□□ -0.35
Scrt1Q99M85 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scrt1Q99M85 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scrt1Q99M85 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scrt1Q99M85 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Scrt1Q99M85 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scrt1Q99M85 Gm11543-201ENSMUST00000120758 370 ntBASIC12.84□□□□□ -0.35
Scrt1Q99M85 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scrt1Q99M85 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.84□□□□□ -0.35
Scrt1Q99M85 Gm18187-201ENSMUST00000196476 984 ntBASIC12.84□□□□□ -0.35
Scrt1Q99M85 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.84□□□□□ -0.35
Scrt1Q99M85 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.84□□□□□ -0.35
Scrt1Q99M85 Gm9063-201ENSMUST00000223299 582 ntBASIC12.84□□□□□ -0.35
Scrt1Q99M85 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scrt1Q99M85 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.84□□□□□ -0.35
Scrt1Q99M85 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scrt1Q99M85 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Scrt1Q99M85 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Scrt1Q99M85 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scrt1Q99M85 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.84□□□□□ -0.35
Scrt1Q99M85 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scrt1Q99M85 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scrt1Q99M85 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scrt1Q99M85 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Scrt1Q99M85 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Scrt1Q99M85 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Scrt1Q99M85 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Scrt1Q99M85 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Scrt1Q99M85 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Scrt1Q99M85 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scrt1Q99M85 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Scrt1Q99M85 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scrt1Q99M85 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scrt1Q99M85 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scrt1Q99M85 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scrt1Q99M85 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scrt1Q99M85 Gm14719-201ENSMUST00000121891 340 ntBASIC12.83□□□□□ -0.36
Scrt1Q99M85 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.83□□□□□ -0.36
Scrt1Q99M85 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scrt1Q99M85 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.83□□□□□ -0.36
Scrt1Q99M85 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scrt1Q99M85 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scrt1Q99M85 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scrt1Q99M85 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scrt1Q99M85 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.83□□□□□ -0.36
Scrt1Q99M85 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scrt1Q99M85 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scrt1Q99M85 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Scrt1Q99M85 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scrt1Q99M85 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Scrt1Q99M85 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Scrt1Q99M85 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scrt1Q99M85 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Scrt1Q99M85 Sybu-209ENSMUST00000228639 4113 ntBASIC12.83□□□□□ -0.36
Scrt1Q99M85 Syt7-204ENSMUST00000223586 1344 ntBASIC12.83□□□□□ -0.36
Scrt1Q99M85 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scrt1Q99M85 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Scrt1Q99M85 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scrt1Q99M85 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scrt1Q99M85 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Scrt1Q99M85 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scrt1Q99M85 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.82□□□□□ -0.36
Scrt1Q99M85 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.82□□□□□ -0.36
Scrt1Q99M85 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scrt1Q99M85 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms