Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdca3Q99M54 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cdca3Q99M54 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdca3Q99M54 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.62□□□□□ -0.23
Cdca3Q99M54 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.62□□□□□ -0.23
Cdca3Q99M54 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdca3Q99M54 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cdca3Q99M54 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdca3Q99M54 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdca3Q99M54 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdca3Q99M54 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Gm13597-201ENSMUST00000121239 375 ntBASIC13.61□□□□□ -0.23
Cdca3Q99M54 Gm11745-201ENSMUST00000121669 448 ntBASIC13.61□□□□□ -0.23
Cdca3Q99M54 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.61□□□□□ -0.23
Cdca3Q99M54 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.61□□□□□ -0.23
Cdca3Q99M54 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.61□□□□□ -0.23
Cdca3Q99M54 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cdca3Q99M54 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdca3Q99M54 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdca3Q99M54 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdca3Q99M54 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cdca3Q99M54 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdca3Q99M54 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Gm18489-201ENSMUST00000172565 551 ntBASIC13.6□□□□□ -0.23
Cdca3Q99M54 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.6□□□□□ -0.23
Cdca3Q99M54 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.6□□□□□ -0.23
Cdca3Q99M54 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.6□□□□□ -0.23
Cdca3Q99M54 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdca3Q99M54 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdca3Q99M54 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms