Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.53□□□□□ -0.08
Retreg1dQ8VE91 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.53□□□□□ -0.08
Retreg1dQ8VE91 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retreg1dQ8VE91 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retreg1dQ8VE91 Gm10576-201ENSMUST00000191927 825 ntBASIC14.53□□□□□ -0.08
Retreg1dQ8VE91 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retreg1dQ8VE91 Gm5312-201ENSMUST00000203728 547 ntBASIC14.53□□□□□ -0.08
Retreg1dQ8VE91 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.53□□□□□ -0.08
Retreg1dQ8VE91 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.53□□□□□ -0.08
Retreg1dQ8VE91 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.53□□□□□ -0.08
Retreg1dQ8VE91 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retreg1dQ8VE91 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Retreg1dQ8VE91 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retreg1dQ8VE91 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retreg1dQ8VE91 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retreg1dQ8VE91 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.53□□□□□ -0.08
Retreg1dQ8VE91 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Retreg1dQ8VE91 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.53□□□□□ -0.08
Retreg1dQ8VE91 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retreg1dQ8VE91 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retreg1dQ8VE91 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retreg1dQ8VE91 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Retreg1dQ8VE91 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retreg1dQ8VE91 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.53□□□□□ -0.08
Retreg1dQ8VE91 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retreg1dQ8VE91 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Retreg1dQ8VE91 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Retreg1dQ8VE91 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retreg1dQ8VE91 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retreg1dQ8VE91 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retreg1dQ8VE91 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retreg1dQ8VE91 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retreg1dQ8VE91 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retreg1dQ8VE91 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retreg1dQ8VE91 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retreg1dQ8VE91 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retreg1dQ8VE91 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.52□□□□□ -0.08
Retreg1dQ8VE91 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
Retreg1dQ8VE91 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retreg1dQ8VE91 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Retreg1dQ8VE91 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retreg1dQ8VE91 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retreg1dQ8VE91 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Retreg1dQ8VE91 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Retreg1dQ8VE91 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retreg1dQ8VE91 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retreg1dQ8VE91 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Retreg1dQ8VE91 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.52□□□□□ -0.09
Retreg1dQ8VE91 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.52□□□□□ -0.09
Retreg1dQ8VE91 Gm43474-201ENSMUST00000196415 774 ntBASIC14.52□□□□□ -0.09
Retreg1dQ8VE91 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.52□□□□□ -0.09
Retreg1dQ8VE91 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Retreg1dQ8VE91 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Retreg1dQ8VE91 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Retreg1dQ8VE91 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Retreg1dQ8VE91 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retreg1dQ8VE91 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retreg1dQ8VE91 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retreg1dQ8VE91 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retreg1dQ8VE91 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.52□□□□□ -0.09
Retreg1dQ8VE91 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retreg1dQ8VE91 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retreg1dQ8VE91 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Retreg1dQ8VE91 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retreg1dQ8VE91 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retreg1dQ8VE91 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retreg1dQ8VE91 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retreg1dQ8VE91 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retreg1dQ8VE91 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retreg1dQ8VE91 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retreg1dQ8VE91 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retreg1dQ8VE91 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Retreg1dQ8VE91 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retreg1dQ8VE91 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retreg1dQ8VE91 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
Retreg1dQ8VE91 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.51□□□□□ -0.09
Retreg1dQ8VE91 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retreg1dQ8VE91 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retreg1dQ8VE91 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.51□□□□□ -0.09
Retreg1dQ8VE91 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.51□□□□□ -0.09
Retreg1dQ8VE91 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.51□□□□□ -0.09
Retreg1dQ8VE91 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retreg1dQ8VE91 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.51□□□□□ -0.09
Retreg1dQ8VE91 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.51□□□□□ -0.09
Retreg1dQ8VE91 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.51□□□□□ -0.09
Retreg1dQ8VE91 Gm43125-201ENSMUST00000201724 730 ntBASIC14.51□□□□□ -0.09
Retreg1dQ8VE91 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Retreg1dQ8VE91 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retreg1dQ8VE91 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retreg1dQ8VE91 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
Retreg1dQ8VE91 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retreg1dQ8VE91 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retreg1dQ8VE91 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retreg1dQ8VE91 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Retreg1dQ8VE91 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retreg1dQ8VE91 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retreg1dQ8VE91 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retreg1dQ8VE91 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retreg1dQ8VE91 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.5□□□□□ -0.09
Retreg1dQ8VE91 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms