Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Slf1Q8R3P9 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slf1Q8R3P9 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slf1Q8R3P9 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slf1Q8R3P9 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Slf1Q8R3P9 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slf1Q8R3P9 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Slf1Q8R3P9 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Slf1Q8R3P9 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slf1Q8R3P9 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slf1Q8R3P9 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slf1Q8R3P9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Slf1Q8R3P9 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slf1Q8R3P9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.82□□□□□ -0.04
Slf1Q8R3P9 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.82□□□□□ -0.04
Slf1Q8R3P9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slf1Q8R3P9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slf1Q8R3P9 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slf1Q8R3P9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slf1Q8R3P9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slf1Q8R3P9 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Slf1Q8R3P9 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Slf1Q8R3P9 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slf1Q8R3P9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slf1Q8R3P9 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slf1Q8R3P9 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.82□□□□□ -0.04
Slf1Q8R3P9 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slf1Q8R3P9 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Slf1Q8R3P9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slf1Q8R3P9 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slf1Q8R3P9 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Slf1Q8R3P9 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slf1Q8R3P9 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.81□□□□□ -0.04
Slf1Q8R3P9 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slf1Q8R3P9 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slf1Q8R3P9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Slf1Q8R3P9 Gm27867-201ENSMUST00000184778 125 ntBASIC14.81□□□□□ -0.04
Slf1Q8R3P9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slf1Q8R3P9 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.81□□□□□ -0.04
Slf1Q8R3P9 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.81□□□□□ -0.04
Slf1Q8R3P9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.81□□□□□ -0.04
Slf1Q8R3P9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slf1Q8R3P9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slf1Q8R3P9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slf1Q8R3P9 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slf1Q8R3P9 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slf1Q8R3P9 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slf1Q8R3P9 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Slf1Q8R3P9 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.81□□□□□ -0.04
Slf1Q8R3P9 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Slf1Q8R3P9 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slf1Q8R3P9 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slf1Q8R3P9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.81□□□□□ -0.04
Slf1Q8R3P9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slf1Q8R3P9 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.81□□□□□ -0.04
Slf1Q8R3P9 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slf1Q8R3P9 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slf1Q8R3P9 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Gm15372-201ENSMUST00000120729 834 ntBASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slf1Q8R3P9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Gm25745-201ENSMUST00000174945 133 ntBASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Gm8825-201ENSMUST00000182565 998 ntBASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Gm4518-201ENSMUST00000182638 718 ntBASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Gm17807-201ENSMUST00000186869 298 ntBASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Slf1Q8R3P9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Slf1Q8R3P9 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms