Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.91■□□□□ 0.46
Sf3a1Q8K4Z5 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sf3a1Q8K4Z5 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sf3a1Q8K4Z5 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sf3a1Q8K4Z5 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sf3a1Q8K4Z5 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sf3a1Q8K4Z5 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sf3a1Q8K4Z5 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.91■□□□□ 0.46
Sf3a1Q8K4Z5 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Sf3a1Q8K4Z5 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sf3a1Q8K4Z5 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sf3a1Q8K4Z5 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sf3a1Q8K4Z5 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sf3a1Q8K4Z5 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sf3a1Q8K4Z5 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sf3a1Q8K4Z5 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sf3a1Q8K4Z5 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.9■□□□□ 0.46
Sf3a1Q8K4Z5 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sf3a1Q8K4Z5 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sf3a1Q8K4Z5 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Sf3a1Q8K4Z5 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sf3a1Q8K4Z5 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sf3a1Q8K4Z5 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.9■□□□□ 0.46
Sf3a1Q8K4Z5 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.9■□□□□ 0.46
Sf3a1Q8K4Z5 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sf3a1Q8K4Z5 Gm5479-201ENSMUST00000160578 435 ntBASIC17.9■□□□□ 0.46
Sf3a1Q8K4Z5 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.9■□□□□ 0.46
Sf3a1Q8K4Z5 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.9■□□□□ 0.46
Sf3a1Q8K4Z5 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.9■□□□□ 0.46
Sf3a1Q8K4Z5 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sf3a1Q8K4Z5 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sf3a1Q8K4Z5 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sf3a1Q8K4Z5 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sf3a1Q8K4Z5 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sf3a1Q8K4Z5 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sf3a1Q8K4Z5 Gm38042-201ENSMUST00000191614 5208 ntBASIC17.9■□□□□ 0.46
Sf3a1Q8K4Z5 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Sf3a1Q8K4Z5 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.89■□□□□ 0.46
Sf3a1Q8K4Z5 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Sf3a1Q8K4Z5 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.89■□□□□ 0.46
Sf3a1Q8K4Z5 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sf3a1Q8K4Z5 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sf3a1Q8K4Z5 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sf3a1Q8K4Z5 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sf3a1Q8K4Z5 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.89■□□□□ 0.45
Sf3a1Q8K4Z5 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sf3a1Q8K4Z5 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sf3a1Q8K4Z5 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sf3a1Q8K4Z5 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sf3a1Q8K4Z5 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sf3a1Q8K4Z5 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Sf3a1Q8K4Z5 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.89■□□□□ 0.45
Sf3a1Q8K4Z5 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sf3a1Q8K4Z5 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sf3a1Q8K4Z5 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sf3a1Q8K4Z5 Mir6990-201ENSMUST00000183724 91 ntBASIC17.89■□□□□ 0.45
Sf3a1Q8K4Z5 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.89■□□□□ 0.45
Sf3a1Q8K4Z5 Olfr286-202ENSMUST00000205305 969 ntBASIC17.89■□□□□ 0.45
Sf3a1Q8K4Z5 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.89■□□□□ 0.45
Sf3a1Q8K4Z5 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sf3a1Q8K4Z5 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.89■□□□□ 0.45
Sf3a1Q8K4Z5 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sf3a1Q8K4Z5 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Sf3a1Q8K4Z5 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Sf3a1Q8K4Z5 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sf3a1Q8K4Z5 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Sf3a1Q8K4Z5 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sf3a1Q8K4Z5 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Gm2810-201ENSMUST00000118681 990 ntBASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Gm44335-201ENSMUST00000196879 141 ntBASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Gm44297-201ENSMUST00000198304 141 ntBASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Gm44346-201ENSMUST00000198851 141 ntBASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Carlr-201ENSMUST00000181515 2574 ntBASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sf3a1Q8K4Z5 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms