Protein–RNA interactions for Protein: Q8CD60

UPF0583 protein C15orf59 homolog, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CD60 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Q8CD60 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Q8CD60 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Q8CD60 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.39■□□□□ 0.05
Q8CD60 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Q8CD60 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Q8CD60 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Q8CD60 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Q8CD60 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Q8CD60 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Q8CD60 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Q8CD60 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.38■□□□□ 0.05
Q8CD60 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Q8CD60 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Q8CD60 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Q8CD60 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Q8CD60 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.38■□□□□ 0.05
Q8CD60 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.38■□□□□ 0.05
Q8CD60 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.38■□□□□ 0.05
Q8CD60 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.38■□□□□ 0.05
Q8CD60 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Q8CD60 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.38■□□□□ 0.05
Q8CD60 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Q8CD60 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Q8CD60 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Q8CD60 Gm18057-201ENSMUST00000208220 503 ntBASIC15.38■□□□□ 0.05
Q8CD60 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.38■□□□□ 0.05
Q8CD60 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Q8CD60 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Q8CD60 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Q8CD60 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Q8CD60 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Q8CD60 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Q8CD60 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Q8CD60 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Q8CD60 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Q8CD60 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Q8CD60 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Q8CD60 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Q8CD60 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Q8CD60 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Q8CD60 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Q8CD60 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Q8CD60 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Q8CD60 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.37■□□□□ 0.05
Q8CD60 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Q8CD60 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Q8CD60 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Q8CD60 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Q8CD60 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Q8CD60 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.37■□□□□ 0.05
Q8CD60 Mir1895-201ENSMUST00000122615 79 ntBASIC15.37■□□□□ 0.05
Q8CD60 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.37■□□□□ 0.05
Q8CD60 Gm5479-201ENSMUST00000160578 435 ntBASIC15.37■□□□□ 0.05
Q8CD60 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.37■□□□□ 0.05
Q8CD60 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Q8CD60 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.37■□□□□ 0.05
Q8CD60 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.37■□□□□ 0.05
Q8CD60 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Q8CD60 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Q8CD60 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Q8CD60 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Q8CD60 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Q8CD60 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.37■□□□□ 0.05
Q8CD60 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Q8CD60 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Q8CD60 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.37■□□□□ 0.05
Q8CD60 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Q8CD60 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Q8CD60 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Q8CD60 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Q8CD60 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.37■□□□□ 0.05
Q8CD60 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Q8CD60 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Q8CD60 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Q8CD60 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.36■□□□□ 0.05
Q8CD60 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Q8CD60 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Q8CD60 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Q8CD60 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Q8CD60 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Q8CD60 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Q8CD60 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Q8CD60 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Q8CD60 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.36■□□□□ 0.05
Q8CD60 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Q8CD60 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Q8CD60 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Q8CD60 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.36■□□□□ 0.05
Q8CD60 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Q8CD60 Rprl2-201ENSMUST00000157150 290 ntBASIC15.36■□□□□ 0.05
Q8CD60 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.36■□□□□ 0.05
Q8CD60 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.36■□□□□ 0.05
Q8CD60 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.36■□□□□ 0.05
Q8CD60 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Q8CD60 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Q8CD60 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Q8CD60 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Q8CD60 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Q8CD60 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms