Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.36□□□□□ -0.11
Pcdh19Q80TF3 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Gm25144-201ENSMUST00000179561 110 ntBASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Gm25352-201ENSMUST00000179815 110 ntBASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Gm17837-201ENSMUST00000186435 985 ntBASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Gm20949-201ENSMUST00000206478 952 ntBASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh19Q80TF3 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Gm9726-201ENSMUST00000180321 678 ntBASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Gm2451-201ENSMUST00000199447 999 ntBASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Gm10290-201ENSMUST00000200451 999 ntBASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh19Q80TF3 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh19Q80TF3 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh19Q80TF3 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh19Q80TF3 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh19Q80TF3 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms