Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn4bQ7M729 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn4bQ7M729 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.26□□□□□ -0.13
Scn4bQ7M729 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn4bQ7M729 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn4bQ7M729 Gm11779-201ENSMUST00000118541 368 ntBASIC14.26□□□□□ -0.13
Scn4bQ7M729 Gm15467-201ENSMUST00000120582 445 ntBASIC14.26□□□□□ -0.13
Scn4bQ7M729 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.26□□□□□ -0.13
Scn4bQ7M729 Mir8117-201ENSMUST00000184773 107 ntBASIC14.26□□□□□ -0.13
Scn4bQ7M729 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.26□□□□□ -0.13
Scn4bQ7M729 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn4bQ7M729 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.26□□□□□ -0.13
Scn4bQ7M729 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.26□□□□□ -0.13
Scn4bQ7M729 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn4bQ7M729 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn4bQ7M729 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn4bQ7M729 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Scn4bQ7M729 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.26□□□□□ -0.13
Scn4bQ7M729 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.26□□□□□ -0.13
Scn4bQ7M729 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.26□□□□□ -0.13
Scn4bQ7M729 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn4bQ7M729 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Scn4bQ7M729 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Scn4bQ7M729 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn4bQ7M729 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Scn4bQ7M729 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Scn4bQ7M729 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn4bQ7M729 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn4bQ7M729 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.25□□□□□ -0.13
Scn4bQ7M729 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn4bQ7M729 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn4bQ7M729 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn4bQ7M729 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn4bQ7M729 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn4bQ7M729 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn4bQ7M729 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn4bQ7M729 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.25□□□□□ -0.13
Scn4bQ7M729 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn4bQ7M729 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn4bQ7M729 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.25□□□□□ -0.13
Scn4bQ7M729 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Scn4bQ7M729 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn4bQ7M729 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn4bQ7M729 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn4bQ7M729 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn4bQ7M729 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn4bQ7M729 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn4bQ7M729 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn4bQ7M729 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.25□□□□□ -0.13
Scn4bQ7M729 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Scn4bQ7M729 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn4bQ7M729 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn4bQ7M729 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn4bQ7M729 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Scn4bQ7M729 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn4bQ7M729 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn4bQ7M729 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.24□□□□□ -0.13
Scn4bQ7M729 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.24□□□□□ -0.13
Scn4bQ7M729 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn4bQ7M729 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.24□□□□□ -0.13
Scn4bQ7M729 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Scn4bQ7M729 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn4bQ7M729 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn4bQ7M729 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn4bQ7M729 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn4bQ7M729 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn4bQ7M729 Gm8000-201ENSMUST00000188378 592 ntBASIC14.24□□□□□ -0.13
Scn4bQ7M729 Gm44492-201ENSMUST00000197012 141 ntBASIC14.24□□□□□ -0.13
Scn4bQ7M729 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn4bQ7M729 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.24□□□□□ -0.13
Scn4bQ7M729 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.24□□□□□ -0.13
Scn4bQ7M729 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Scn4bQ7M729 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn4bQ7M729 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn4bQ7M729 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn4bQ7M729 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn4bQ7M729 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn4bQ7M729 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.24□□□□□ -0.13
Scn4bQ7M729 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.24□□□□□ -0.13
Scn4bQ7M729 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn4bQ7M729 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn4bQ7M729 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.24□□□□□ -0.13
Scn4bQ7M729 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Scn4bQ7M729 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.24□□□□□ -0.13
Scn4bQ7M729 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn4bQ7M729 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.24□□□□□ -0.13
Scn4bQ7M729 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn4bQ7M729 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Scn4bQ7M729 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms