Protein–RNA interactions for Protein: Q6ZQM0

Rffl, E3 ubiquitin-protein ligase rififylin, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RfflQ6ZQM0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Gm10013-201ENSMUST00000106074 672 ntBASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RfflQ6ZQM0 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RfflQ6ZQM0 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RfflQ6ZQM0 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RfflQ6ZQM0 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RfflQ6ZQM0 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
RfflQ6ZQM0 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RfflQ6ZQM0 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.16□□□□□ -0.14
RfflQ6ZQM0 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.16□□□□□ -0.14
RfflQ6ZQM0 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RfflQ6ZQM0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.16□□□□□ -0.14
RfflQ6ZQM0 Gm11950-201ENSMUST00000121615 838 ntBASIC14.16□□□□□ -0.14
RfflQ6ZQM0 Gm12497-201ENSMUST00000138778 237 ntBASIC14.16□□□□□ -0.14
RfflQ6ZQM0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.16□□□□□ -0.14
RfflQ6ZQM0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RfflQ6ZQM0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RfflQ6ZQM0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RfflQ6ZQM0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RfflQ6ZQM0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RfflQ6ZQM0 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RfflQ6ZQM0 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RfflQ6ZQM0 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
RfflQ6ZQM0 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RfflQ6ZQM0 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RfflQ6ZQM0 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RfflQ6ZQM0 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.16□□□□□ -0.14
RfflQ6ZQM0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RfflQ6ZQM0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RfflQ6ZQM0 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RfflQ6ZQM0 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RfflQ6ZQM0 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RfflQ6ZQM0 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RfflQ6ZQM0 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RfflQ6ZQM0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RfflQ6ZQM0 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RfflQ6ZQM0 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RfflQ6ZQM0 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RfflQ6ZQM0 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RfflQ6ZQM0 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RfflQ6ZQM0 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RfflQ6ZQM0 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RfflQ6ZQM0 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RfflQ6ZQM0 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RfflQ6ZQM0 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RfflQ6ZQM0 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.15□□□□□ -0.14
RfflQ6ZQM0 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RfflQ6ZQM0 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RfflQ6ZQM0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RfflQ6ZQM0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RfflQ6ZQM0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.15□□□□□ -0.14
RfflQ6ZQM0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.15□□□□□ -0.14
RfflQ6ZQM0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.15□□□□□ -0.14
RfflQ6ZQM0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RfflQ6ZQM0 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RfflQ6ZQM0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RfflQ6ZQM0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RfflQ6ZQM0 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RfflQ6ZQM0 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RfflQ6ZQM0 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RfflQ6ZQM0 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
RfflQ6ZQM0 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RfflQ6ZQM0 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RfflQ6ZQM0 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RfflQ6ZQM0 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RfflQ6ZQM0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms