Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC18.12■□□□□ 0.49
Usp48Q3V0C5 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp48Q3V0C5 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp48Q3V0C5 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.12■□□□□ 0.49
Usp48Q3V0C5 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp48Q3V0C5 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp48Q3V0C5 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Usp48Q3V0C5 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Usp48Q3V0C5 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp48Q3V0C5 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Usp48Q3V0C5 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Usp48Q3V0C5 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Usp48Q3V0C5 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Usp48Q3V0C5 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp48Q3V0C5 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Usp48Q3V0C5 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Usp48Q3V0C5 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC18.11■□□□□ 0.49
Usp48Q3V0C5 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.11■□□□□ 0.49
Usp48Q3V0C5 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp48Q3V0C5 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC18.11■□□□□ 0.49
Usp48Q3V0C5 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC18.11■□□□□ 0.49
Usp48Q3V0C5 Gm6539-201ENSMUST00000119157 1064 ntBASIC18.11■□□□□ 0.49
Usp48Q3V0C5 Gm15483-201ENSMUST00000120338 456 ntBASIC18.11■□□□□ 0.49
Usp48Q3V0C5 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Usp48Q3V0C5 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp48Q3V0C5 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Usp48Q3V0C5 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.11■□□□□ 0.49
Usp48Q3V0C5 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp48Q3V0C5 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp48Q3V0C5 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp48Q3V0C5 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.11■□□□□ 0.49
Usp48Q3V0C5 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Usp48Q3V0C5 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp48Q3V0C5 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Usp48Q3V0C5 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Usp48Q3V0C5 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Usp48Q3V0C5 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp48Q3V0C5 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp48Q3V0C5 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp48Q3V0C5 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Usp48Q3V0C5 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC18.1■□□□□ 0.49
Usp48Q3V0C5 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp48Q3V0C5 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp48Q3V0C5 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Usp48Q3V0C5 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp48Q3V0C5 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Usp48Q3V0C5 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Usp48Q3V0C5 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp48Q3V0C5 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Usp48Q3V0C5 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Usp48Q3V0C5 Gm15321-201ENSMUST00000121290 288 ntBASIC18.1■□□□□ 0.49
Usp48Q3V0C5 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC18.1■□□□□ 0.49
Usp48Q3V0C5 Gm18766-201ENSMUST00000189811 808 ntBASIC18.1■□□□□ 0.49
Usp48Q3V0C5 Gm44344-201ENSMUST00000200287 129 ntBASIC18.1■□□□□ 0.49
Usp48Q3V0C5 Gm45384-201ENSMUST00000210451 277 ntBASIC18.1■□□□□ 0.49
Usp48Q3V0C5 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC18.1■□□□□ 0.49
Usp48Q3V0C5 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp48Q3V0C5 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp48Q3V0C5 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp48Q3V0C5 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp48Q3V0C5 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp48Q3V0C5 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp48Q3V0C5 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp48Q3V0C5 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp48Q3V0C5 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC18.1■□□□□ 0.49
Usp48Q3V0C5 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp48Q3V0C5 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Usp48Q3V0C5 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp48Q3V0C5 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp48Q3V0C5 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp48Q3V0C5 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp48Q3V0C5 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.09■□□□□ 0.49
Usp48Q3V0C5 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp48Q3V0C5 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Usp48Q3V0C5 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Usp48Q3V0C5 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp48Q3V0C5 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Usp48Q3V0C5 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp48Q3V0C5 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp48Q3V0C5 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp48Q3V0C5 Gm11478-201ENSMUST00000117851 599 ntBASIC18.09■□□□□ 0.49
Usp48Q3V0C5 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp48Q3V0C5 Gm23984-201ENSMUST00000157139 203 ntBASIC18.09■□□□□ 0.49
Usp48Q3V0C5 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp48Q3V0C5 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC18.09■□□□□ 0.49
Usp48Q3V0C5 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp48Q3V0C5 Gm27680-201ENSMUST00000184192 160 ntBASIC18.09■□□□□ 0.49
Usp48Q3V0C5 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Usp48Q3V0C5 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp48Q3V0C5 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp48Q3V0C5 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp48Q3V0C5 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp48Q3V0C5 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp48Q3V0C5 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp48Q3V0C5 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp48Q3V0C5 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Usp48Q3V0C5 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp48Q3V0C5 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp48Q3V0C5 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp48Q3V0C5 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms