Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Smn1P97801 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smn1P97801 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smn1P97801 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Smn1P97801 Acot6-202ENSMUST00000222921 3622 ntBASIC12.56□□□□□ -0.4
Smn1P97801 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smn1P97801 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smn1P97801 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smn1P97801 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smn1P97801 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Smn1P97801 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smn1P97801 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smn1P97801 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smn1P97801 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smn1P97801 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smn1P97801 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smn1P97801 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smn1P97801 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smn1P97801 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smn1P97801 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smn1P97801 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smn1P97801 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smn1P97801 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Smn1P97801 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.56□□□□□ -0.4
Smn1P97801 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smn1P97801 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smn1P97801 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Smn1P97801 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smn1P97801 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smn1P97801 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.56□□□□□ -0.4
Smn1P97801 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Smn1P97801 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smn1P97801 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smn1P97801 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smn1P97801 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Smn1P97801 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smn1P97801 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smn1P97801 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smn1P97801 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smn1P97801 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smn1P97801 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smn1P97801 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smn1P97801 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smn1P97801 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smn1P97801 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smn1P97801 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
Smn1P97801 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smn1P97801 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Smn1P97801 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smn1P97801 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smn1P97801 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Smn1P97801 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smn1P97801 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smn1P97801 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smn1P97801 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smn1P97801 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smn1P97801 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.55□□□□□ -0.4
Smn1P97801 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smn1P97801 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smn1P97801 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.55□□□□□ -0.4
Smn1P97801 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.55□□□□□ -0.4
Smn1P97801 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smn1P97801 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smn1P97801 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Smn1P97801 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.55□□□□□ -0.4
Smn1P97801 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smn1P97801 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Smn1P97801 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smn1P97801 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smn1P97801 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smn1P97801 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smn1P97801 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.55□□□□□ -0.4
Smn1P97801 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smn1P97801 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Smn1P97801 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.55□□□□□ -0.4
Smn1P97801 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smn1P97801 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smn1P97801 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smn1P97801 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smn1P97801 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.54□□□□□ -0.4
Smn1P97801 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Smn1P97801 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smn1P97801 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smn1P97801 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smn1P97801 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Smn1P97801 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smn1P97801 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smn1P97801 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.54□□□□□ -0.4
Smn1P97801 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Smn1P97801 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smn1P97801 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smn1P97801 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Smn1P97801 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.54□□□□□ -0.4
Smn1P97801 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Smn1P97801 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.54□□□□□ -0.4
Smn1P97801 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms