Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stra8P70278 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stra8P70278 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Stra8P70278 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Stra8P70278 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC20.22■□□□□ 0.83
Stra8P70278 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Stra8P70278 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Stra8P70278 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Stra8P70278 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Stra8P70278 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Stra8P70278 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Stra8P70278 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Stra8P70278 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Stra8P70278 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Stra8P70278 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Stra8P70278 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Stra8P70278 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Stra8P70278 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Stra8P70278 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Stra8P70278 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Stra8P70278 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Stra8P70278 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stra8P70278 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stra8P70278 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Stra8P70278 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stra8P70278 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stra8P70278 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stra8P70278 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC20.21■□□□□ 0.83
Stra8P70278 Gm2308-201ENSMUST00000166539 1004 ntBASIC20.21■□□□□ 0.83
Stra8P70278 Gm5682-201ENSMUST00000173402 505 ntBASIC20.21■□□□□ 0.83
Stra8P70278 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Stra8P70278 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Stra8P70278 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stra8P70278 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Stra8P70278 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stra8P70278 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Stra8P70278 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stra8P70278 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Stra8P70278 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stra8P70278 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Stra8P70278 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Stra8P70278 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stra8P70278 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stra8P70278 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Stra8P70278 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stra8P70278 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stra8P70278 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stra8P70278 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stra8P70278 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC20.2■□□□□ 0.82
Stra8P70278 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC20.2■□□□□ 0.82
Stra8P70278 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Stra8P70278 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC20.2■□□□□ 0.82
Stra8P70278 Gm15590-201ENSMUST00000078419 552 ntBASIC20.2■□□□□ 0.82
Stra8P70278 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Stra8P70278 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stra8P70278 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stra8P70278 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC20.2■□□□□ 0.82
Stra8P70278 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stra8P70278 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Stra8P70278 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Stra8P70278 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Stra8P70278 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Stra8P70278 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Stra8P70278 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Stra8P70278 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.19■□□□□ 0.82
Stra8P70278 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Stra8P70278 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC20.19■□□□□ 0.82
Stra8P70278 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Stra8P70278 Gm2651-201ENSMUST00000203560 838 ntBASIC20.19■□□□□ 0.82
Stra8P70278 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC20.19■□□□□ 0.82
Stra8P70278 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Stra8P70278 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Stra8P70278 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Stra8P70278 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Stra8P70278 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Stra8P70278 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Stra8P70278 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Stra8P70278 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC20.19■□□□□ 0.82
Stra8P70278 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Stra8P70278 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Stra8P70278 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
Stra8P70278 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Stra8P70278 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Stra8P70278 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Stra8P70278 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Stra8P70278 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Stra8P70278 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Stra8P70278 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Stra8P70278 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Stra8P70278 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Stra8P70278 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Stra8P70278 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Stra8P70278 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
Stra8P70278 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
Stra8P70278 AC138767.1-201ENSMUST00000222661 415 ntBASIC20.18■□□□□ 0.82
Stra8P70278 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Stra8P70278 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Stra8P70278 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Stra8P70278 Gm29361-201ENSMUST00000183323 2000 ntBASIC20.18■□□□□ 0.82
Stra8P70278 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms