Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vps33bP59016 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vps33bP59016 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps33bP59016 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps33bP59016 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Vps33bP59016 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps33bP59016 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps33bP59016 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps33bP59016 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Vps33bP59016 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.24■□□□□ 0.51
Vps33bP59016 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC18.24■□□□□ 0.51
Vps33bP59016 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC18.24■□□□□ 0.51
Vps33bP59016 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC18.24■□□□□ 0.51
Vps33bP59016 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Vps33bP59016 Gm38671-201ENSMUST00000200573 130 ntBASIC18.24■□□□□ 0.51
Vps33bP59016 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC18.24■□□□□ 0.51
Vps33bP59016 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC18.24■□□□□ 0.51
Vps33bP59016 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC18.24■□□□□ 0.51
Vps33bP59016 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Vps33bP59016 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Vps33bP59016 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps33bP59016 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps33bP59016 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Vps33bP59016 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps33bP59016 Gm21038-201ENSMUST00000222205 1383 ntBASIC18.24■□□□□ 0.51
Vps33bP59016 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC18.24■□□□□ 0.51
Vps33bP59016 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps33bP59016 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.24■□□□□ 0.51
Vps33bP59016 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Vps33bP59016 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps33bP59016 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Vps33bP59016 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps33bP59016 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Vps33bP59016 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps33bP59016 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps33bP59016 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps33bP59016 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.23■□□□□ 0.51
Vps33bP59016 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps33bP59016 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Vps33bP59016 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps33bP59016 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps33bP59016 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps33bP59016 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC18.23■□□□□ 0.51
Vps33bP59016 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC18.23■□□□□ 0.51
Vps33bP59016 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Vps33bP59016 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Vps33bP59016 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC18.23■□□□□ 0.51
Vps33bP59016 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Vps33bP59016 Gm19309-201ENSMUST00000218295 205 ntBASIC18.23■□□□□ 0.51
Vps33bP59016 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps33bP59016 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps33bP59016 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps33bP59016 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Vps33bP59016 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps33bP59016 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Vps33bP59016 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps33bP59016 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Vps33bP59016 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps33bP59016 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Vps33bP59016 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps33bP59016 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps33bP59016 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps33bP59016 Gm16177-201ENSMUST00000120728 718 ntBASIC18.22■□□□□ 0.51
Vps33bP59016 Gm13385-201ENSMUST00000121089 220 ntBASIC18.22■□□□□ 0.51
Vps33bP59016 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vps33bP59016 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps33bP59016 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vps33bP59016 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC18.22■□□□□ 0.51
Vps33bP59016 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vps33bP59016 Gm18027-201ENSMUST00000218947 619 ntBASIC18.22■□□□□ 0.51
Vps33bP59016 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vps33bP59016 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps33bP59016 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps33bP59016 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps33bP59016 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Vps33bP59016 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps33bP59016 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps33bP59016 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps33bP59016 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps33bP59016 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps33bP59016 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps33bP59016 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Vps33bP59016 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Vps33bP59016 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
Vps33bP59016 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps33bP59016 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps33bP59016 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps33bP59016 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Vps33bP59016 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps33bP59016 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC18.21■□□□□ 0.51
Vps33bP59016 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps33bP59016 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC18.21■□□□□ 0.51
Vps33bP59016 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps33bP59016 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC18.21■□□□□ 0.51
Vps33bP59016 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Vps33bP59016 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Vps33bP59016 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Vps33bP59016 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps33bP59016 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps33bP59016 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms