Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Pdx1P52946 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdx1P52946 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdx1P52946 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdx1P52946 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdx1P52946 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdx1P52946 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdx1P52946 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Pdx1P52946 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pdx1P52946 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.47□□□□□ -0.09
Pdx1P52946 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pdx1P52946 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdx1P52946 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Pdx1P52946 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pdx1P52946 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.47□□□□□ -0.09
Pdx1P52946 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdx1P52946 Gm5479-201ENSMUST00000160578 435 ntBASIC14.47□□□□□ -0.09
Pdx1P52946 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.47□□□□□ -0.09
Pdx1P52946 Gm27702-201ENSMUST00000184512 56 ntBASIC14.47□□□□□ -0.09
Pdx1P52946 Gm37935-201ENSMUST00000192012 982 ntBASIC14.47□□□□□ -0.09
Pdx1P52946 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.47□□□□□ -0.09
Pdx1P52946 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pdx1P52946 Gm18057-201ENSMUST00000208220 503 ntBASIC14.47□□□□□ -0.09
Pdx1P52946 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.47□□□□□ -0.09
Pdx1P52946 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.47□□□□□ -0.09
Pdx1P52946 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Pdx1P52946 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdx1P52946 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.47□□□□□ -0.09
Pdx1P52946 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.47□□□□□ -0.09
Pdx1P52946 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdx1P52946 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.47□□□□□ -0.09
Pdx1P52946 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdx1P52946 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.47□□□□□ -0.09
Pdx1P52946 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdx1P52946 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pdx1P52946 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Pdx1P52946 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.47□□□□□ -0.09
Pdx1P52946 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdx1P52946 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdx1P52946 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pdx1P52946 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdx1P52946 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdx1P52946 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.46□□□□□ -0.09
Pdx1P52946 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pdx1P52946 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdx1P52946 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.46□□□□□ -0.09
Pdx1P52946 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Pdx1P52946 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.46□□□□□ -0.09
Pdx1P52946 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdx1P52946 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.46□□□□□ -0.09
Pdx1P52946 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.46□□□□□ -0.09
Pdx1P52946 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.46□□□□□ -0.09
Pdx1P52946 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Pdx1P52946 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pdx1P52946 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.46□□□□□ -0.09
Pdx1P52946 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pdx1P52946 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pdx1P52946 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdx1P52946 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Pdx1P52946 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pdx1P52946 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pdx1P52946 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pdx1P52946 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pdx1P52946 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pdx1P52946 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pdx1P52946 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pdx1P52946 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdx1P52946 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdx1P52946 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdx1P52946 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.45□□□□□ -0.1
Pdx1P52946 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdx1P52946 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdx1P52946 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pdx1P52946 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdx1P52946 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdx1P52946 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pdx1P52946 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Pdx1P52946 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Pdx1P52946 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Pdx1P52946 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.45□□□□□ -0.1
Pdx1P52946 Mir1895-201ENSMUST00000122615 79 ntBASIC14.45□□□□□ -0.1
Pdx1P52946 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.45□□□□□ -0.1
Pdx1P52946 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.45□□□□□ -0.1
Pdx1P52946 Rprl2-201ENSMUST00000157150 290 ntBASIC14.45□□□□□ -0.1
Pdx1P52946 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pdx1P52946 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.45□□□□□ -0.1
Pdx1P52946 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.45□□□□□ -0.1
Pdx1P52946 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pdx1P52946 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pdx1P52946 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdx1P52946 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdx1P52946 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdx1P52946 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.45□□□□□ -0.1
Pdx1P52946 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdx1P52946 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Pdx1P52946 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pdx1P52946 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdx1P52946 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdx1P52946 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdx1P52946 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms