Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh4P39038 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh4P39038 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.01□□□□□ -0.17
Cdh4P39038 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh4P39038 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh4P39038 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.01□□□□□ -0.17
Cdh4P39038 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh4P39038 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh4P39038 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh4P39038 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh4P39038 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh4P39038 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh4P39038 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh4P39038 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh4P39038 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh4P39038 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh4P39038 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.01□□□□□ -0.17
Cdh4P39038 Gm13365-201ENSMUST00000121188 973 ntBASIC14.01□□□□□ -0.17
Cdh4P39038 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.01□□□□□ -0.17
Cdh4P39038 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.01□□□□□ -0.17
Cdh4P39038 Gm26308-201ENSMUST00000157768 69 ntBASIC14.01□□□□□ -0.17
Cdh4P39038 Gm18737-201ENSMUST00000173594 937 ntBASIC14.01□□□□□ -0.17
Cdh4P39038 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.01□□□□□ -0.17
Cdh4P39038 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh4P39038 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh4P39038 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cdh4P39038 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh4P39038 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cdh4P39038 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh4P39038 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh4P39038 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh4P39038 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh4P39038 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.01□□□□□ -0.17
Cdh4P39038 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdh4P39038 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdh4P39038 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh4P39038 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh4P39038 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh4P39038 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh4P39038 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cdh4P39038 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh4P39038 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdh4P39038 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh4P39038 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14□□□□□ -0.17
Cdh4P39038 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh4P39038 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh4P39038 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdh4P39038 Gm13464-201ENSMUST00000119418 935 ntBASIC14□□□□□ -0.17
Cdh4P39038 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14□□□□□ -0.17
Cdh4P39038 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdh4P39038 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdh4P39038 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh4P39038 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cdh4P39038 Gm18889-201ENSMUST00000174284 929 ntBASIC14□□□□□ -0.17
Cdh4P39038 Gm6944-201ENSMUST00000182449 1006 ntBASIC14□□□□□ -0.17
Cdh4P39038 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cdh4P39038 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cdh4P39038 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh4P39038 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Cdh4P39038 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh4P39038 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdh4P39038 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdh4P39038 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh4P39038 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh4P39038 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh4P39038 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh4P39038 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh4P39038 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14□□□□□ -0.17
Cdh4P39038 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh4P39038 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh4P39038 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cdh4P39038 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Cdh4P39038 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh4P39038 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cdh4P39038 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh4P39038 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.99□□□□□ -0.17
Cdh4P39038 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh4P39038 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh4P39038 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh4P39038 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh4P39038 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cdh4P39038 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh4P39038 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh4P39038 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh4P39038 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh4P39038 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh4P39038 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh4P39038 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh4P39038 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh4P39038 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh4P39038 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.99□□□□□ -0.17
Cdh4P39038 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Cdh4P39038 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.99□□□□□ -0.17
Cdh4P39038 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.99□□□□□ -0.17
Cdh4P39038 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Cdh4P39038 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh4P39038 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh4P39038 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh4P39038 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdh4P39038 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms