Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06344 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06344 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P06344 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06344 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06344 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P06344 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06344 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06344 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
P06344 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06344 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
P06344 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06344 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06344 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
P06344 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
P06344 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06344 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06344 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
P06344 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06344 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06344 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
P06344 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
P06344 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06344 Gm13616-201ENSMUST00000120600 222 ntBASIC13.05□□□□□ -0.32
P06344 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
P06344 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
P06344 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
P06344 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06344 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.05□□□□□ -0.32
P06344 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.05□□□□□ -0.32
P06344 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.05□□□□□ -0.32
P06344 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
P06344 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
P06344 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.05□□□□□ -0.32
P06344 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06344 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06344 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
P06344 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
P06344 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06344 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
P06344 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P06344 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06344 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06344 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P06344 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06344 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P06344 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06344 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06344 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06344 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06344 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06344 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06344 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.04□□□□□ -0.32
P06344 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
P06344 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06344 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06344 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06344 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P06344 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06344 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P06344 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06344 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06344 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06344 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06344 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.04□□□□□ -0.32
P06344 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.04□□□□□ -0.32
P06344 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P06344 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.04□□□□□ -0.32
P06344 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.04□□□□□ -0.32
P06344 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.04□□□□□ -0.32
P06344 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.04□□□□□ -0.32
P06344 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P06344 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06344 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06344 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06344 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06344 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P06344 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06344 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P06344 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P06344 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.04□□□□□ -0.32
P06344 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
P06344 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.03□□□□□ -0.32
P06344 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P06344 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P06344 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P06344 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P06344 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P06344 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.03□□□□□ -0.32
P06344 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
P06344 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P06344 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P06344 Mir449b-201ENSMUST00000104833 80 ntBASIC13.03□□□□□ -0.32
P06344 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
P06344 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
P06344 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.03□□□□□ -0.32
P06344 Gm24158-201ENSMUST00000175263 71 ntBASIC13.03□□□□□ -0.32
P06344 Gm25948-201ENSMUST00000175334 112 ntBASIC13.03□□□□□ -0.32
P06344 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P06344 Gm10253-201ENSMUST00000194270 940 ntBASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms