Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Gm11779-201ENSMUST00000118541 368 ntBASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Gm44492-201ENSMUST00000197012 141 ntBASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lnp1A0A1B0GSK3 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 Gm2272-201ENSMUST00000194903 582 ntBASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lnp1A0A1B0GSK3 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lnp1A0A1B0GSK3 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lnp1A0A1B0GSK3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lnp1A0A1B0GSK3 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lnp1A0A1B0GSK3 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lnp1A0A1B0GSK3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lnp1A0A1B0GSK3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lnp1A0A1B0GSK3 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Lnp1A0A1B0GSK3 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lnp1A0A1B0GSK3 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lnp1A0A1B0GSK3 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lnp1A0A1B0GSK3 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lnp1A0A1B0GSK3 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lnp1A0A1B0GSK3 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lnp1A0A1B0GSK3 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms