Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Trav3n-3A0A0G2JEM0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.11□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.11□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Carlr-201ENSMUST00000181515 2574 ntBASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Prkcz2-201ENSMUST00000206136 1756 ntBASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gm11950-201ENSMUST00000121615 838 ntBASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gm18041-201ENSMUST00000218210 618 ntBASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gm7367-201ENSMUST00000057611 492 ntBASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms