Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 AC112698.1-201ENST00000510299 916 ntBASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 AL441883.1-201ENST00000566170 1045 ntBASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 AC004263.2-201ENST00000617183 678 ntBASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
THUMPD1Q9NXG2 REXO1L11P-201ENST00000620964 1927 ntBASIC16.58■□□□□ 0.25
THUMPD1Q9NXG2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
THUMPD1Q9NXG2 OR6D1P-203ENST00000641209 4860 ntBASIC16.58■□□□□ 0.25
THUMPD1Q9NXG2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
THUMPD1Q9NXG2 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
THUMPD1Q9NXG2 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.58■□□□□ 0.25
THUMPD1Q9NXG2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
THUMPD1Q9NXG2 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
THUMPD1Q9NXG2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
THUMPD1Q9NXG2 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
THUMPD1Q9NXG2 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
THUMPD1Q9NXG2 AC113347.1-201ENST00000413321 391 ntBASIC16.58■□□□□ 0.24
THUMPD1Q9NXG2 AC005104.2-201ENST00000427818 678 ntBASIC16.58■□□□□ 0.24
THUMPD1Q9NXG2 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.58■□□□□ 0.24
THUMPD1Q9NXG2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.58■□□□□ 0.24
THUMPD1Q9NXG2 ZNF444P1-201ENST00000559497 298 ntBASIC16.58■□□□□ 0.24
THUMPD1Q9NXG2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.58■□□□□ 0.24
THUMPD1Q9NXG2 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.58■□□□□ 0.24
THUMPD1Q9NXG2 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.58■□□□□ 0.24
THUMPD1Q9NXG2 AC005363.2-201ENST00000618631 242 ntBASIC16.58■□□□□ 0.24
THUMPD1Q9NXG2 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
THUMPD1Q9NXG2 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.58■□□□□ 0.24
THUMPD1Q9NXG2 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
THUMPD1Q9NXG2 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
THUMPD1Q9NXG2 AC016396.2-201ENST00000562575 1417 ntBASIC16.58■□□□□ 0.24
THUMPD1Q9NXG2 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.58■□□□□ 0.24
THUMPD1Q9NXG2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
THUMPD1Q9NXG2 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.58■□□□□ 0.24
THUMPD1Q9NXG2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
THUMPD1Q9NXG2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
THUMPD1Q9NXG2 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
THUMPD1Q9NXG2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.58■□□□□ 0.24
THUMPD1Q9NXG2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 IGHGP-201ENST00000390555 1178 ntBASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 AL137013.1-201ENST00000432946 1228 ntBASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 HOMER2P1-201ENST00000455653 964 ntBASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 AP003733.1-201ENST00000491725 852 ntBASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 AC010203.1-204ENST00000548782 407 ntBASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 AL118508.1-201ENST00000613502 2345 ntBASIC16.57■□□□□ 0.24
THUMPD1Q9NXG2 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms