Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ssmem1Q9D9Y8 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ssmem1Q9D9Y8 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ssmem1Q9D9Y8 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ssmem1Q9D9Y8 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ssmem1Q9D9Y8 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ssmem1Q9D9Y8 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ssmem1Q9D9Y8 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ssmem1Q9D9Y8 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ssmem1Q9D9Y8 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ssmem1Q9D9Y8 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ssmem1Q9D9Y8 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssmem1Q9D9Y8 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ssmem1Q9D9Y8 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssmem1Q9D9Y8 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Ssmem1Q9D9Y8 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ssmem1Q9D9Y8 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssmem1Q9D9Y8 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.65□□□□□ -0.38
Ssmem1Q9D9Y8 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssmem1Q9D9Y8 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Ssmem1Q9D9Y8 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ssmem1Q9D9Y8 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Ssmem1Q9D9Y8 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssmem1Q9D9Y8 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssmem1Q9D9Y8 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssmem1Q9D9Y8 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssmem1Q9D9Y8 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms