Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Lysmd3Q99LE3 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 Gm2451-201ENSMUST00000199447 999 ntBASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 Gm10290-201ENSMUST00000200451 999 ntBASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lysmd3Q99LE3 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.22■□□□□ 0.03
Lysmd3Q99LE3 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd3Q99LE3 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd3Q99LE3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.22■□□□□ 0.03
Lysmd3Q99LE3 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd3Q99LE3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd3Q99LE3 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd3Q99LE3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd3Q99LE3 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd3Q99LE3 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.22■□□□□ 0.03
Lysmd3Q99LE3 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd3Q99LE3 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.22■□□□□ 0.03
Lysmd3Q99LE3 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.22■□□□□ 0.03
Lysmd3Q99LE3 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.22■□□□□ 0.03
Lysmd3Q99LE3 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd3Q99LE3 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd3Q99LE3 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Lysmd3Q99LE3 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd3Q99LE3 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd3Q99LE3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd3Q99LE3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd3Q99LE3 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd3Q99LE3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd3Q99LE3 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd3Q99LE3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd3Q99LE3 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd3Q99LE3 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd3Q99LE3 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd3Q99LE3 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lysmd3Q99LE3 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd3Q99LE3 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd3Q99LE3 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.21■□□□□ 0.03
Lysmd3Q99LE3 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd3Q99LE3 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd3Q99LE3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Lysmd3Q99LE3 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd3Q99LE3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd3Q99LE3 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd3Q99LE3 Gm8749-201ENSMUST00000117737 331 ntBASIC15.21■□□□□ 0.03
Lysmd3Q99LE3 Gm13015-201ENSMUST00000118674 204 ntBASIC15.21■□□□□ 0.03
Lysmd3Q99LE3 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd3Q99LE3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd3Q99LE3 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.21■□□□□ 0.03
Lysmd3Q99LE3 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.21■□□□□ 0.03
Lysmd3Q99LE3 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.21■□□□□ 0.03
Lysmd3Q99LE3 Gm10576-201ENSMUST00000191927 825 ntBASIC15.21■□□□□ 0.03
Lysmd3Q99LE3 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.21■□□□□ 0.03
Lysmd3Q99LE3 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.21■□□□□ 0.03
Lysmd3Q99LE3 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.21■□□□□ 0.03
Lysmd3Q99LE3 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd3Q99LE3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd3Q99LE3 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd3Q99LE3 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd3Q99LE3 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd3Q99LE3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Lysmd3Q99LE3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lysmd3Q99LE3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
Lysmd3Q99LE3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lysmd3Q99LE3 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lysmd3Q99LE3 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Lysmd3Q99LE3 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd3Q99LE3 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd3Q99LE3 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Lysmd3Q99LE3 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd3Q99LE3 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd3Q99LE3 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.2■□□□□ 0.02
Lysmd3Q99LE3 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms