Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Vcpip1Q8CDG3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vcpip1Q8CDG3 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vcpip1Q8CDG3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vcpip1Q8CDG3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vcpip1Q8CDG3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.77■□□□□ 0.12
Vcpip1Q8CDG3 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Vcpip1Q8CDG3 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vcpip1Q8CDG3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vcpip1Q8CDG3 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vcpip1Q8CDG3 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vcpip1Q8CDG3 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.77■□□□□ 0.12
Vcpip1Q8CDG3 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vcpip1Q8CDG3 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Vcpip1Q8CDG3 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.77■□□□□ 0.11
Vcpip1Q8CDG3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.77■□□□□ 0.11
Vcpip1Q8CDG3 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vcpip1Q8CDG3 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Vcpip1Q8CDG3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Vcpip1Q8CDG3 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vcpip1Q8CDG3 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Vcpip1Q8CDG3 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Vcpip1Q8CDG3 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vcpip1Q8CDG3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Vcpip1Q8CDG3 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.76■□□□□ 0.11
Vcpip1Q8CDG3 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vcpip1Q8CDG3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.76■□□□□ 0.11
Vcpip1Q8CDG3 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vcpip1Q8CDG3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vcpip1Q8CDG3 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.76■□□□□ 0.11
Vcpip1Q8CDG3 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vcpip1Q8CDG3 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Vcpip1Q8CDG3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Vcpip1Q8CDG3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
Vcpip1Q8CDG3 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vcpip1Q8CDG3 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vcpip1Q8CDG3 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vcpip1Q8CDG3 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Vcpip1Q8CDG3 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.76■□□□□ 0.11
Vcpip1Q8CDG3 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vcpip1Q8CDG3 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vcpip1Q8CDG3 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vcpip1Q8CDG3 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vcpip1Q8CDG3 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vcpip1Q8CDG3 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vcpip1Q8CDG3 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vcpip1Q8CDG3 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
Vcpip1Q8CDG3 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Vcpip1Q8CDG3 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vcpip1Q8CDG3 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vcpip1Q8CDG3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vcpip1Q8CDG3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vcpip1Q8CDG3 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vcpip1Q8CDG3 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vcpip1Q8CDG3 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vcpip1Q8CDG3 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Vcpip1Q8CDG3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vcpip1Q8CDG3 Gm2756-201ENSMUST00000195851 400 ntBASIC15.75■□□□□ 0.11
Vcpip1Q8CDG3 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.75■□□□□ 0.11
Vcpip1Q8CDG3 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.75■□□□□ 0.11
Vcpip1Q8CDG3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vcpip1Q8CDG3 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vcpip1Q8CDG3 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vcpip1Q8CDG3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vcpip1Q8CDG3 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vcpip1Q8CDG3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vcpip1Q8CDG3 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vcpip1Q8CDG3 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vcpip1Q8CDG3 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.75■□□□□ 0.11
Vcpip1Q8CDG3 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vcpip1Q8CDG3 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Vcpip1Q8CDG3 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.75■□□□□ 0.11
Vcpip1Q8CDG3 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Gm7063-201ENSMUST00000186840 981 ntBASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Psmb5-202ENSMUST00000227257 622 ntBASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vcpip1Q8CDG3 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms