Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rft1Q8C3B8 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rft1Q8C3B8 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rft1Q8C3B8 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.11□□□□□ -0.31
Rft1Q8C3B8 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rft1Q8C3B8 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rft1Q8C3B8 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rft1Q8C3B8 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rft1Q8C3B8 Gm8344-201ENSMUST00000119813 856 ntBASIC13.11□□□□□ -0.31
Rft1Q8C3B8 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.11□□□□□ -0.31
Rft1Q8C3B8 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rft1Q8C3B8 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.11□□□□□ -0.31
Rft1Q8C3B8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rft1Q8C3B8 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rft1Q8C3B8 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rft1Q8C3B8 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rft1Q8C3B8 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rft1Q8C3B8 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rft1Q8C3B8 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rft1Q8C3B8 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rft1Q8C3B8 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rft1Q8C3B8 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rft1Q8C3B8 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Rft1Q8C3B8 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rft1Q8C3B8 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.11□□□□□ -0.31
Rft1Q8C3B8 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rft1Q8C3B8 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rft1Q8C3B8 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rft1Q8C3B8 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rft1Q8C3B8 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rft1Q8C3B8 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Rft1Q8C3B8 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rft1Q8C3B8 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rft1Q8C3B8 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rft1Q8C3B8 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rft1Q8C3B8 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rft1Q8C3B8 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.09□□□□□ -0.31
Rft1Q8C3B8 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rft1Q8C3B8 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Rft1Q8C3B8 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rft1Q8C3B8 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Rft1Q8C3B8 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rft1Q8C3B8 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.09□□□□□ -0.31
Rft1Q8C3B8 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Rft1Q8C3B8 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rft1Q8C3B8 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rft1Q8C3B8 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rft1Q8C3B8 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rft1Q8C3B8 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rft1Q8C3B8 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rft1Q8C3B8 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rft1Q8C3B8 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rft1Q8C3B8 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.08□□□□□ -0.31
Rft1Q8C3B8 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rft1Q8C3B8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Rft1Q8C3B8 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rft1Q8C3B8 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rft1Q8C3B8 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rft1Q8C3B8 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Rft1Q8C3B8 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rft1Q8C3B8 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms