Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.16□□□□□ -0.14
Rnf44Q3UHJ8 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Rnf44Q3UHJ8 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rnf44Q3UHJ8 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rnf44Q3UHJ8 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf44Q3UHJ8 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf44Q3UHJ8 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rnf44Q3UHJ8 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Gm18889-201ENSMUST00000174284 929 ntBASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rnf44Q3UHJ8 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Rnf44Q3UHJ8 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Rnf44Q3UHJ8 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf44Q3UHJ8 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf44Q3UHJ8 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf44Q3UHJ8 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Rnf44Q3UHJ8 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rnf44Q3UHJ8 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf44Q3UHJ8 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf44Q3UHJ8 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf44Q3UHJ8 Gm11543-201ENSMUST00000120758 370 ntBASIC14.14□□□□□ -0.15
Rnf44Q3UHJ8 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf44Q3UHJ8 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.14□□□□□ -0.15
Rnf44Q3UHJ8 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.14□□□□□ -0.15
Rnf44Q3UHJ8 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.14□□□□□ -0.15
Rnf44Q3UHJ8 Gm27920-201ENSMUST00000183953 96 ntBASIC14.14□□□□□ -0.15
Rnf44Q3UHJ8 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rnf44Q3UHJ8 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.14□□□□□ -0.15
Rnf44Q3UHJ8 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf44Q3UHJ8 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf44Q3UHJ8 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf44Q3UHJ8 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.14□□□□□ -0.15
Rnf44Q3UHJ8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf44Q3UHJ8 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rnf44Q3UHJ8 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf44Q3UHJ8 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf44Q3UHJ8 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf44Q3UHJ8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf44Q3UHJ8 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf44Q3UHJ8 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf44Q3UHJ8 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf44Q3UHJ8 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf44Q3UHJ8 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf44Q3UHJ8 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rnf44Q3UHJ8 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf44Q3UHJ8 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf44Q3UHJ8 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf44Q3UHJ8 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf44Q3UHJ8 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf44Q3UHJ8 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rnf44Q3UHJ8 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf44Q3UHJ8 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.13□□□□□ -0.15
Rnf44Q3UHJ8 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf44Q3UHJ8 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf44Q3UHJ8 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf44Q3UHJ8 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf44Q3UHJ8 Gm18737-201ENSMUST00000173594 937 ntBASIC14.13□□□□□ -0.15
Rnf44Q3UHJ8 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf44Q3UHJ8 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.13□□□□□ -0.15
Rnf44Q3UHJ8 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.13□□□□□ -0.15
Rnf44Q3UHJ8 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf44Q3UHJ8 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms