Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Nup43P59235 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Nup43P59235 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Nup43P59235 Gm18057-201ENSMUST00000208220 503 ntBASIC13.86□□□□□ -0.19
Nup43P59235 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.86□□□□□ -0.19
Nup43P59235 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.86□□□□□ -0.19
Nup43P59235 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nup43P59235 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.86□□□□□ -0.19
Nup43P59235 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Nup43P59235 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup43P59235 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.86□□□□□ -0.19
Nup43P59235 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup43P59235 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup43P59235 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Nup43P59235 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup43P59235 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Nup43P59235 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Nup43P59235 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Nup43P59235 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nup43P59235 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup43P59235 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.86□□□□□ -0.19
Nup43P59235 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup43P59235 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup43P59235 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup43P59235 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.85□□□□□ -0.19
Nup43P59235 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup43P59235 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup43P59235 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup43P59235 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup43P59235 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup43P59235 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nup43P59235 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup43P59235 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Nup43P59235 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.85□□□□□ -0.19
Nup43P59235 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup43P59235 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.85□□□□□ -0.19
Nup43P59235 Gm27920-201ENSMUST00000183953 96 ntBASIC13.85□□□□□ -0.19
Nup43P59235 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Nup43P59235 Gm2451-201ENSMUST00000199447 999 ntBASIC13.85□□□□□ -0.19
Nup43P59235 Gm10290-201ENSMUST00000200451 999 ntBASIC13.85□□□□□ -0.19
Nup43P59235 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Nup43P59235 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup43P59235 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nup43P59235 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup43P59235 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nup43P59235 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.85□□□□□ -0.19
Nup43P59235 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.85□□□□□ -0.19
Nup43P59235 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
Nup43P59235 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup43P59235 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.84□□□□□ -0.19
Nup43P59235 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup43P59235 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup43P59235 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Nup43P59235 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.84□□□□□ -0.19
Nup43P59235 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup43P59235 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup43P59235 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.84□□□□□ -0.19
Nup43P59235 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nup43P59235 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup43P59235 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup43P59235 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.84□□□□□ -0.19
Nup43P59235 Gm13365-201ENSMUST00000121188 973 ntBASIC13.84□□□□□ -0.19
Nup43P59235 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup43P59235 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nup43P59235 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.84□□□□□ -0.19
Nup43P59235 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.84□□□□□ -0.19
Nup43P59235 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Nup43P59235 Carlr-201ENSMUST00000181515 2574 ntBASIC13.84□□□□□ -0.19
Nup43P59235 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup43P59235 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup43P59235 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup43P59235 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Nup43P59235 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Nup43P59235 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.84□□□□□ -0.19
Nup43P59235 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup43P59235 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup43P59235 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup43P59235 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup43P59235 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nup43P59235 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Nup43P59235 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Nup43P59235 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nup43P59235 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nup43P59235 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup43P59235 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Nup43P59235 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup43P59235 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Nup43P59235 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nup43P59235 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nup43P59235 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nup43P59235 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup43P59235 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup43P59235 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Nup43P59235 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup43P59235 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Nup43P59235 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup43P59235 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup43P59235 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup43P59235 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nup43P59235 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms