Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP8P40818 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
USP8P40818 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
USP8P40818 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.23■□□□□ 0.67
USP8P40818 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP8P40818 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP8P40818 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP8P40818 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
USP8P40818 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
USP8P40818 AL671277.2-201ENST00000458060 996 ntBASIC19.23■□□□□ 0.67
USP8P40818 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.23■□□□□ 0.67
USP8P40818 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.23■□□□□ 0.67
USP8P40818 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP8P40818 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.23■□□□□ 0.67
USP8P40818 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.23■□□□□ 0.67
USP8P40818 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.23■□□□□ 0.67
USP8P40818 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.23■□□□□ 0.67
USP8P40818 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP8P40818 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP8P40818 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.23■□□□□ 0.67
USP8P40818 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP8P40818 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP8P40818 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
USP8P40818 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
USP8P40818 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP8P40818 AC046158.3-201ENST00000624947 2558 ntBASIC19.23■□□□□ 0.67
USP8P40818 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP8P40818 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP8P40818 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
USP8P40818 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP8P40818 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP8P40818 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP8P40818 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.22■□□□□ 0.67
USP8P40818 AL353692.3-201ENST00000407031 1396 ntBASIC19.22■□□□□ 0.67
USP8P40818 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP8P40818 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP8P40818 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP8P40818 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP8P40818 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP8P40818 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP8P40818 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
USP8P40818 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP8P40818 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP8P40818 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.22■□□□□ 0.67
USP8P40818 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP8P40818 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.22■□□□□ 0.67
USP8P40818 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.22■□□□□ 0.67
USP8P40818 GPR32P1-201ENST00000601788 811 ntBASIC19.22■□□□□ 0.67
USP8P40818 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
USP8P40818 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
USP8P40818 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.22■□□□□ 0.67
USP8P40818 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.22■□□□□ 0.67
USP8P40818 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.22■□□□□ 0.67
USP8P40818 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP8P40818 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.22■□□□□ 0.67
USP8P40818 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.22■□□□□ 0.67
USP8P40818 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
USP8P40818 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
USP8P40818 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.22■□□□□ 0.67
USP8P40818 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP8P40818 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.22■□□□□ 0.67
USP8P40818 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP8P40818 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.21■□□□□ 0.67
USP8P40818 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP8P40818 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.21■□□□□ 0.67
USP8P40818 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.21■□□□□ 0.67
USP8P40818 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP8P40818 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
USP8P40818 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP8P40818 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP8P40818 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.21■□□□□ 0.67
USP8P40818 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP8P40818 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP8P40818 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP8P40818 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
USP8P40818 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP8P40818 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.21■□□□□ 0.67
USP8P40818 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP8P40818 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP8P40818 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
USP8P40818 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.21■□□□□ 0.67
USP8P40818 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.21■□□□□ 0.67
USP8P40818 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP8P40818 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.21■□□□□ 0.67
USP8P40818 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP8P40818 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP8P40818 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.21■□□□□ 0.67
USP8P40818 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.21■□□□□ 0.67
USP8P40818 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.21■□□□□ 0.67
USP8P40818 AC005332.3-201ENST00000589904 676 ntBASIC19.21■□□□□ 0.67
USP8P40818 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP8P40818 AC083849.1-201ENST00000615227 514 ntBASIC19.21■□□□□ 0.67
USP8P40818 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP8P40818 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
USP8P40818 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP8P40818 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP8P40818 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP8P40818 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP8P40818 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
USP8P40818 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms