Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.8□□□□□ -0.2
Sox6P40645 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.8□□□□□ -0.2
Sox6P40645 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.8□□□□□ -0.2
Sox6P40645 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.8□□□□□ -0.2
Sox6P40645 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
Sox6P40645 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 AV026068-213ENSMUST00000223675 1171 ntBASIC13.8□□□□□ -0.2
Sox6P40645 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.8□□□□□ -0.2
Sox6P40645 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Sox6P40645 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Grk6-207ENSMUST00000225925 2769 ntBASIC13.8□□□□□ -0.2
Sox6P40645 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Sox6P40645 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox6P40645 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox6P40645 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox6P40645 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox6P40645 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox6P40645 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox6P40645 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox6P40645 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox6P40645 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Sox6P40645 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox6P40645 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox6P40645 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox6P40645 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.79□□□□□ -0.2
Sox6P40645 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.79□□□□□ -0.2
Sox6P40645 Gm18733-201ENSMUST00000173950 856 ntBASIC13.79□□□□□ -0.2
Sox6P40645 Mir5131-201ENSMUST00000175426 93 ntBASIC13.79□□□□□ -0.2
Sox6P40645 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox6P40645 Gm37153-201ENSMUST00000193637 231 ntBASIC13.79□□□□□ -0.2
Sox6P40645 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.79□□□□□ -0.2
Sox6P40645 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Sox6P40645 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Sox6P40645 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox6P40645 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox6P40645 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox6P40645 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox6P40645 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox6P40645 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox6P40645 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox6P40645 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox6P40645 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox6P40645 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox6P40645 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox6P40645 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox6P40645 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.79□□□□□ -0.2
Sox6P40645 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox6P40645 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox6P40645 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Sox6P40645 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox6P40645 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Sox6P40645 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Sox6P40645 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox6P40645 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox6P40645 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Sox6P40645 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.78□□□□□ -0.2
Sox6P40645 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox6P40645 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox6P40645 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox6P40645 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
Sox6P40645 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox6P40645 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox6P40645 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox6P40645 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Sox6P40645 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.78□□□□□ -0.2
Sox6P40645 Gm2651-201ENSMUST00000203560 838 ntBASIC13.78□□□□□ -0.2
Sox6P40645 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.78□□□□□ -0.2
Sox6P40645 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.78□□□□□ -0.2
Sox6P40645 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.78□□□□□ -0.2
Sox6P40645 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.78□□□□□ -0.2
Sox6P40645 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox6P40645 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox6P40645 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox6P40645 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox6P40645 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Sox6P40645 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox6P40645 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox6P40645 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Sox6P40645 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox6P40645 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox6P40645 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox6P40645 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox6P40645 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox6P40645 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.78□□□□□ -0.2
Sox6P40645 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox6P40645 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms