Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC18.9■□□□□ 0.62
Hoxc9P09633 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Hoxc9P09633 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxc9P09633 Mir6392-201ENSMUST00000184924 108 ntBASIC18.9■□□□□ 0.62
Hoxc9P09633 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC18.9■□□□□ 0.62
Hoxc9P09633 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxc9P09633 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxc9P09633 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxc9P09633 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxc9P09633 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxc9P09633 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Hoxc9P09633 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxc9P09633 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxc9P09633 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxc9P09633 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Hoxc9P09633 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hoxc9P09633 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.89■□□□□ 0.62
Hoxc9P09633 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Hoxc9P09633 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Hoxc9P09633 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc9P09633 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc9P09633 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc9P09633 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc9P09633 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc9P09633 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Hoxc9P09633 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc9P09633 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc9P09633 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC18.89■□□□□ 0.61
Hoxc9P09633 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC18.89■□□□□ 0.61
Hoxc9P09633 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC18.89■□□□□ 0.61
Hoxc9P09633 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC18.89■□□□□ 0.61
Hoxc9P09633 AC154687.2-201ENSMUST00000223853 640 ntBASIC18.89■□□□□ 0.61
Hoxc9P09633 AC159006.1-201ENSMUST00000226396 258 ntBASIC18.89■□□□□ 0.61
Hoxc9P09633 AC154806.6-201ENSMUST00000228192 202 ntBASIC18.89■□□□□ 0.61
Hoxc9P09633 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc9P09633 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC18.89■□□□□ 0.61
Hoxc9P09633 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc9P09633 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc9P09633 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Hoxc9P09633 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc9P09633 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc9P09633 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc9P09633 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc9P09633 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxc9P09633 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Hoxc9P09633 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc9P09633 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc9P09633 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc9P09633 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc9P09633 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc9P09633 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc9P09633 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc9P09633 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc9P09633 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc9P09633 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc9P09633 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc9P09633 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc9P09633 Gm12882-201ENSMUST00000121696 517 ntBASIC18.88■□□□□ 0.61
Hoxc9P09633 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC18.88■□□□□ 0.61
Hoxc9P09633 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc9P09633 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC18.88■□□□□ 0.61
Hoxc9P09633 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC18.88■□□□□ 0.61
Hoxc9P09633 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC18.88■□□□□ 0.61
Hoxc9P09633 AC155286.1-201ENSMUST00000218632 448 ntBASIC18.88■□□□□ 0.61
Hoxc9P09633 AC139580.1-202ENSMUST00000223574 928 ntBASIC18.88■□□□□ 0.61
Hoxc9P09633 Gm25857-201ENSMUST00000082788 129 ntBASIC18.88■□□□□ 0.61
Hoxc9P09633 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc9P09633 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc9P09633 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc9P09633 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc9P09633 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Hoxc9P09633 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc9P09633 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc9P09633 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc9P09633 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc9P09633 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc9P09633 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxc9P09633 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc9P09633 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Hoxc9P09633 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Hoxc9P09633 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc9P09633 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc9P09633 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc9P09633 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc9P09633 Gm11918-201ENSMUST00000121660 179 ntBASIC18.87■□□□□ 0.61
Hoxc9P09633 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc9P09633 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Hoxc9P09633 Gm8602-201ENSMUST00000184045 607 ntBASIC18.87■□□□□ 0.61
Hoxc9P09633 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Hoxc9P09633 Gm19220-201ENSMUST00000222682 803 ntBASIC18.87■□□□□ 0.61
Hoxc9P09633 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc9P09633 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc9P09633 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc9P09633 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc9P09633 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc9P09633 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc9P09633 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc9P09633 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc9P09633 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxc9P09633 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms