Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Ube3aO08759 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ube3aO08759 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ube3aO08759 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ube3aO08759 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ube3aO08759 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.86■□□□□ 0.13
Ube3aO08759 Gm18489-201ENSMUST00000172565 551 ntBASIC15.86■□□□□ 0.13
Ube3aO08759 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.86■□□□□ 0.13
Ube3aO08759 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.86■□□□□ 0.13
Ube3aO08759 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ube3aO08759 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ube3aO08759 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ube3aO08759 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ube3aO08759 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ube3aO08759 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.86■□□□□ 0.13
Ube3aO08759 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ube3aO08759 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ube3aO08759 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ube3aO08759 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ube3aO08759 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ube3aO08759 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ube3aO08759 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ube3aO08759 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Ube3aO08759 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.85■□□□□ 0.13
Ube3aO08759 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ube3aO08759 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.85■□□□□ 0.13
Ube3aO08759 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ube3aO08759 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Ube3aO08759 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ube3aO08759 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Ube3aO08759 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ube3aO08759 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ube3aO08759 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ube3aO08759 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ube3aO08759 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ube3aO08759 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.85■□□□□ 0.13
Ube3aO08759 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Ube3aO08759 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ube3aO08759 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ube3aO08759 Gm43347-201ENSMUST00000200226 580 ntBASIC15.85■□□□□ 0.13
Ube3aO08759 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ube3aO08759 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ube3aO08759 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ube3aO08759 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ube3aO08759 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Ube3aO08759 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ube3aO08759 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ube3aO08759 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ube3aO08759 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ube3aO08759 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ube3aO08759 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ube3aO08759 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ube3aO08759 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
Ube3aO08759 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Ube3aO08759 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.84■□□□□ 0.13
Ube3aO08759 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Ube3aO08759 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Ube3aO08759 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.84■□□□□ 0.13
Ube3aO08759 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Ube3aO08759 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.84■□□□□ 0.13
Ube3aO08759 Gm12644-201ENSMUST00000119935 606 ntBASIC15.84■□□□□ 0.13
Ube3aO08759 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.84■□□□□ 0.13
Ube3aO08759 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.84■□□□□ 0.13
Ube3aO08759 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.84■□□□□ 0.13
Ube3aO08759 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.84■□□□□ 0.13
Ube3aO08759 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.84■□□□□ 0.13
Ube3aO08759 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.84■□□□□ 0.13
Ube3aO08759 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3aO08759 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms