Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAPPC1Q9Y5R8 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 AP000593.1-201ENST00000393668 712 ntBASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 AL160286.2-201ENST00000567150 934 ntBASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 AC144831.1-201ENST00000573312 2656 ntBASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 AC092384.3-202ENST00000564646 2873 ntBASIC13.38□□□□□ -0.27
TRAPPC1Q9Y5R8 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 LINC02228-203ENST00000641970 1355 ntBASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 RARRES2P1-201ENST00000474487 481 ntBASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 AC013268.1-206ENST00000638368 961 ntBASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 AC112229.1-201ENST00000639295 961 ntBASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 KRT8P3-201ENST00000519669 1449 ntBASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAPPC1Q9Y5R8 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
TRAPPC1Q9Y5R8 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms