Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Upk1aQ9D132 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.91□□□□□ -0.18
Upk1aQ9D132 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Upk1aQ9D132 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Upk1aQ9D132 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Upk1aQ9D132 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Upk1aQ9D132 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Upk1aQ9D132 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Upk1aQ9D132 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Upk1aQ9D132 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Upk1aQ9D132 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Upk1aQ9D132 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Upk1aQ9D132 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Upk1aQ9D132 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Upk1aQ9D132 Gm8749-201ENSMUST00000117737 331 ntBASIC13.91□□□□□ -0.18
Upk1aQ9D132 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Upk1aQ9D132 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Upk1aQ9D132 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Upk1aQ9D132 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.91□□□□□ -0.18
Upk1aQ9D132 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.91□□□□□ -0.18
Upk1aQ9D132 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Upk1aQ9D132 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Upk1aQ9D132 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Upk1aQ9D132 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Upk1aQ9D132 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.91□□□□□ -0.18
Upk1aQ9D132 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Upk1aQ9D132 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.91□□□□□ -0.18
Upk1aQ9D132 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Upk1aQ9D132 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Upk1aQ9D132 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.9□□□□□ -0.18
Upk1aQ9D132 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Upk1aQ9D132 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Upk1aQ9D132 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Upk1aQ9D132 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Upk1aQ9D132 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.9□□□□□ -0.18
Upk1aQ9D132 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Upk1aQ9D132 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Upk1aQ9D132 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.9□□□□□ -0.18
Upk1aQ9D132 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Upk1aQ9D132 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Upk1aQ9D132 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Upk1aQ9D132 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Upk1aQ9D132 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Upk1aQ9D132 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Upk1aQ9D132 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Upk1aQ9D132 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Upk1aQ9D132 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Upk1aQ9D132 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.9□□□□□ -0.18
Upk1aQ9D132 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Upk1aQ9D132 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Upk1aQ9D132 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Upk1aQ9D132 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Upk1aQ9D132 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Upk1aQ9D132 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk1aQ9D132 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Upk1aQ9D132 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk1aQ9D132 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk1aQ9D132 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.89□□□□□ -0.19
Upk1aQ9D132 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.89□□□□□ -0.19
Upk1aQ9D132 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk1aQ9D132 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk1aQ9D132 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Upk1aQ9D132 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk1aQ9D132 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Upk1aQ9D132 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk1aQ9D132 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk1aQ9D132 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.89□□□□□ -0.19
Upk1aQ9D132 Gm18489-201ENSMUST00000172565 551 ntBASIC13.89□□□□□ -0.19
Upk1aQ9D132 Gm4535-201ENSMUST00000182274 558 ntBASIC13.89□□□□□ -0.19
Upk1aQ9D132 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Upk1aQ9D132 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.89□□□□□ -0.19
Upk1aQ9D132 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk1aQ9D132 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Upk1aQ9D132 Gm10355-201ENSMUST00000097146 517 ntBASIC13.89□□□□□ -0.19
Upk1aQ9D132 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.89□□□□□ -0.19
Upk1aQ9D132 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Upk1aQ9D132 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk1aQ9D132 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk1aQ9D132 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk1aQ9D132 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk1aQ9D132 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Upk1aQ9D132 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk1aQ9D132 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.89□□□□□ -0.19
Upk1aQ9D132 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk1aQ9D132 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk1aQ9D132 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk1aQ9D132 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Upk1aQ9D132 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.89□□□□□ -0.19
Upk1aQ9D132 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Upk1aQ9D132 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk1aQ9D132 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.88□□□□□ -0.19
Upk1aQ9D132 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Upk1aQ9D132 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Upk1aQ9D132 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk1aQ9D132 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Upk1aQ9D132 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Upk1aQ9D132 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk1aQ9D132 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk1aQ9D132 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Upk1aQ9D132 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms