Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Gm15483-201ENSMUST00000120338 456 ntBASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gtf2ird2Q99NI3 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm22065-201ENSMUST00000103753 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm22066-201ENSMUST00000103761 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm24932-201ENSMUST00000103763 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm24115-201ENSMUST00000103799 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm22190-201ENSMUST00000103827 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm22191-201ENSMUST00000103831 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm24721-201ENSMUST00000103849 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm28018-201ENSMUST00000103869 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm26399-201ENSMUST00000103937 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm25349-201ENSMUST00000177728 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm23616-201ENSMUST00000177797 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm25871-201ENSMUST00000177816 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm24752-201ENSMUST00000178240 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm24496-201ENSMUST00000178287 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm25649-201ENSMUST00000178476 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm25548-201ENSMUST00000178681 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm23147-201ENSMUST00000178841 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm26095-201ENSMUST00000179270 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm22171-201ENSMUST00000179283 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm23936-201ENSMUST00000179354 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm22619-201ENSMUST00000179516 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm25255-201ENSMUST00000179579 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm24755-201ENSMUST00000179691 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm26506-201ENSMUST00000179692 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm25086-201ENSMUST00000179931 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm23243-201ENSMUST00000180047 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm24659-201ENSMUST00000180212 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm24169-201ENSMUST00000180244 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm23689-201ENSMUST00000180354 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm27359-201ENSMUST00000184153 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm27785-201ENSMUST00000184268 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm27466-201ENSMUST00000184396 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm27703-201ENSMUST00000184836 110 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.1■□□□□ 0.01
Gtf2ird2Q99NI3 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms