Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx6-1Q99MA9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx6-1Q99MA9 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx6-1Q99MA9 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx6-1Q99MA9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Nkx6-1Q99MA9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Nkx6-1Q99MA9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.75□□□□□ -0.21
Nkx6-1Q99MA9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx6-1Q99MA9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx6-1Q99MA9 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx6-1Q99MA9 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx6-1Q99MA9 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx6-1Q99MA9 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx6-1Q99MA9 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Nkx6-1Q99MA9 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.75□□□□□ -0.21
Nkx6-1Q99MA9 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.75□□□□□ -0.21
Nkx6-1Q99MA9 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx6-1Q99MA9 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx6-1Q99MA9 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx6-1Q99MA9 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx6-1Q99MA9 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Nkx6-1Q99MA9 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx6-1Q99MA9 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.75□□□□□ -0.21
Nkx6-1Q99MA9 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx6-1Q99MA9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx6-1Q99MA9 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx6-1Q99MA9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx6-1Q99MA9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Nkx6-1Q99MA9 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx6-1Q99MA9 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx6-1Q99MA9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx6-1Q99MA9 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx6-1Q99MA9 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Gm15806-201ENSMUST00000120696 955 ntBASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx6-1Q99MA9 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx6-1Q99MA9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx6-1Q99MA9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx6-1Q99MA9 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx6-1Q99MA9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx6-1Q99MA9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx6-1Q99MA9 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx6-1Q99MA9 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.73□□□□□ -0.21
Nkx6-1Q99MA9 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx6-1Q99MA9 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx6-1Q99MA9 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.73□□□□□ -0.21
Nkx6-1Q99MA9 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.73□□□□□ -0.21
Nkx6-1Q99MA9 Gm9229-201ENSMUST00000222777 126 ntBASIC13.73□□□□□ -0.21
Nkx6-1Q99MA9 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx6-1Q99MA9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx6-1Q99MA9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx6-1Q99MA9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx6-1Q99MA9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx6-1Q99MA9 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Nkx6-1Q99MA9 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx6-1Q99MA9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx6-1Q99MA9 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx6-1Q99MA9 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx6-1Q99MA9 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.73□□□□□ -0.21
Nkx6-1Q99MA9 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Nkx6-1Q99MA9 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms