Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Gm13884-201ENSMUST00000118103 829 ntBASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Gm10819-201ENSMUST00000099988 561 ntBASIC14.1□□□□□ -0.15
Lsm1Q8VC85 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Lsm1Q8VC85 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Gm13464-201ENSMUST00000119418 935 ntBASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Gm9726-201ENSMUST00000180321 678 ntBASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Gm27300-201ENSMUST00000184085 97 ntBASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Gm27335-201ENSMUST00000184758 97 ntBASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Gm5864-201ENSMUST00000202263 970 ntBASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm1Q8VC85 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.15
Lsm1Q8VC85 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lsm1Q8VC85 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
Lsm1Q8VC85 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Lsm1Q8VC85 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Lsm1Q8VC85 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm1Q8VC85 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm1Q8VC85 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm1Q8VC85 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Lsm1Q8VC85 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm1Q8VC85 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm1Q8VC85 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Lsm1Q8VC85 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm1Q8VC85 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Lsm1Q8VC85 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm1Q8VC85 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm1Q8VC85 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm1Q8VC85 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Lsm1Q8VC85 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.08□□□□□ -0.16
Lsm1Q8VC85 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.08□□□□□ -0.16
Lsm1Q8VC85 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm1Q8VC85 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm1Q8VC85 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm1Q8VC85 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm1Q8VC85 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm1Q8VC85 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm1Q8VC85 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm1Q8VC85 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Lsm1Q8VC85 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms