Protein–RNA interactions for Protein: Q8CGU1

Calcoco1, Calcium-binding and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calcoco1Q8CGU1 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Calcoco1Q8CGU1 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.37■□□□□ 0.05
Calcoco1Q8CGU1 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Calcoco1Q8CGU1 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Calcoco1Q8CGU1 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Calcoco1Q8CGU1 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Calcoco1Q8CGU1 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Calcoco1Q8CGU1 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Calcoco1Q8CGU1 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.37■□□□□ 0.05
Calcoco1Q8CGU1 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Calcoco1Q8CGU1 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Calcoco1Q8CGU1 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Calcoco1Q8CGU1 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Calcoco1Q8CGU1 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
Calcoco1Q8CGU1 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.36■□□□□ 0.05
Calcoco1Q8CGU1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Calcoco1Q8CGU1 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Calcoco1Q8CGU1 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Calcoco1Q8CGU1 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.36■□□□□ 0.05
Calcoco1Q8CGU1 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Calcoco1Q8CGU1 Gm23547-201ENSMUST00000158210 271 ntBASIC15.36■□□□□ 0.05
Calcoco1Q8CGU1 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.36■□□□□ 0.05
Calcoco1Q8CGU1 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Calcoco1Q8CGU1 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Calcoco1Q8CGU1 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Calcoco1Q8CGU1 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Calcoco1Q8CGU1 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Calcoco1Q8CGU1 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Calcoco1Q8CGU1 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Calcoco1Q8CGU1 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Calcoco1Q8CGU1 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Calcoco1Q8CGU1 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Calcoco1Q8CGU1 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 Gm8097-201ENSMUST00000117903 829 ntBASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Calcoco1Q8CGU1 Gm42829-201ENSMUST00000198417 2585 ntBASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Calcoco1Q8CGU1 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms