Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim9Q8C7M3 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim9Q8C7M3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.21■□□□□ 0.19
Trim9Q8C7M3 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.21■□□□□ 0.19
Trim9Q8C7M3 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.21■□□□□ 0.19
Trim9Q8C7M3 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trim9Q8C7M3 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim9Q8C7M3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim9Q8C7M3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Trim9Q8C7M3 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim9Q8C7M3 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim9Q8C7M3 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trim9Q8C7M3 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trim9Q8C7M3 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Trim9Q8C7M3 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim9Q8C7M3 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim9Q8C7M3 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Trim9Q8C7M3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.2■□□□□ 0.18
Trim9Q8C7M3 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim9Q8C7M3 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim9Q8C7M3 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim9Q8C7M3 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim9Q8C7M3 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim9Q8C7M3 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim9Q8C7M3 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
Trim9Q8C7M3 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim9Q8C7M3 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.2■□□□□ 0.18
Trim9Q8C7M3 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim9Q8C7M3 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim9Q8C7M3 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.2■□□□□ 0.18
Trim9Q8C7M3 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim9Q8C7M3 Gm6443-201ENSMUST00000203599 874 ntBASIC16.2■□□□□ 0.18
Trim9Q8C7M3 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim9Q8C7M3 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim9Q8C7M3 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim9Q8C7M3 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim9Q8C7M3 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim9Q8C7M3 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trim9Q8C7M3 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim9Q8C7M3 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trim9Q8C7M3 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim9Q8C7M3 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim9Q8C7M3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim9Q8C7M3 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim9Q8C7M3 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim9Q8C7M3 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.19■□□□□ 0.18
Trim9Q8C7M3 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim9Q8C7M3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim9Q8C7M3 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim9Q8C7M3 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim9Q8C7M3 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim9Q8C7M3 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trim9Q8C7M3 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trim9Q8C7M3 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim9Q8C7M3 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.18■□□□□ 0.18
Trim9Q8C7M3 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim9Q8C7M3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim9Q8C7M3 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim9Q8C7M3 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim9Q8C7M3 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.18■□□□□ 0.18
Trim9Q8C7M3 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim9Q8C7M3 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim9Q8C7M3 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.18■□□□□ 0.18
Trim9Q8C7M3 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim9Q8C7M3 Gm5479-201ENSMUST00000160578 435 ntBASIC16.18■□□□□ 0.18
Trim9Q8C7M3 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.18■□□□□ 0.18
Trim9Q8C7M3 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.18■□□□□ 0.18
Trim9Q8C7M3 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim9Q8C7M3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms