Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Prdm4Q80V63 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Prdm4Q80V63 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Prdm4Q80V63 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Prdm4Q80V63 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Prdm4Q80V63 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prdm4Q80V63 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Prdm4Q80V63 Gm25406-201ENSMUST00000157599 105 ntBASIC15.33■□□□□ 0.04
Prdm4Q80V63 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.33■□□□□ 0.04
Prdm4Q80V63 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.33■□□□□ 0.04
Prdm4Q80V63 Gm9172-201ENSMUST00000212092 954 ntBASIC15.33■□□□□ 0.04
Prdm4Q80V63 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prdm4Q80V63 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prdm4Q80V63 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Prdm4Q80V63 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Prdm4Q80V63 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Prdm4Q80V63 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
Prdm4Q80V63 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.33■□□□□ 0.04
Prdm4Q80V63 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Prdm4Q80V63 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prdm4Q80V63 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.33■□□□□ 0.04
Prdm4Q80V63 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prdm4Q80V63 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prdm4Q80V63 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Prdm4Q80V63 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prdm4Q80V63 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Gm6257-201ENSMUST00000163864 910 ntBASIC15.32■□□□□ 0.04
Prdm4Q80V63 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.32■□□□□ 0.04
Prdm4Q80V63 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.32■□□□□ 0.04
Prdm4Q80V63 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Prdm4Q80V63 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Pck2-205ENSMUST00000226352 2784 ntBASIC15.31■□□□□ 0.04
Prdm4Q80V63 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prdm4Q80V63 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prdm4Q80V63 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Gm44771-201ENSMUST00000206975 626 ntBASIC15.31■□□□□ 0.04
Prdm4Q80V63 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.31■□□□□ 0.04
Prdm4Q80V63 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Prdm4Q80V63 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms