Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Exosc3Q7TQK4 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.52□□□□□ -0.24
Exosc3Q7TQK4 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Exosc3Q7TQK4 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Exosc3Q7TQK4 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Exosc3Q7TQK4 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Exosc3Q7TQK4 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Exosc3Q7TQK4 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Exosc3Q7TQK4 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Exosc3Q7TQK4 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Exosc3Q7TQK4 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.52□□□□□ -0.25
Exosc3Q7TQK4 Gm18737-201ENSMUST00000173594 937 ntBASIC13.52□□□□□ -0.25
Exosc3Q7TQK4 Gm27920-201ENSMUST00000183953 96 ntBASIC13.52□□□□□ -0.25
Exosc3Q7TQK4 Olfr286-202ENSMUST00000205305 969 ntBASIC13.52□□□□□ -0.25
Exosc3Q7TQK4 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Exosc3Q7TQK4 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Exosc3Q7TQK4 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Exosc3Q7TQK4 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.52□□□□□ -0.25
Exosc3Q7TQK4 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Exosc3Q7TQK4 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Exosc3Q7TQK4 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Exosc3Q7TQK4 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Exosc3Q7TQK4 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.52□□□□□ -0.25
Exosc3Q7TQK4 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Exosc3Q7TQK4 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.52□□□□□ -0.25
Exosc3Q7TQK4 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Exosc3Q7TQK4 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.52□□□□□ -0.25
Exosc3Q7TQK4 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Exosc3Q7TQK4 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Exosc3Q7TQK4 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Exosc3Q7TQK4 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Exosc3Q7TQK4 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.52□□□□□ -0.25
Exosc3Q7TQK4 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Exosc3Q7TQK4 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Exosc3Q7TQK4 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Exosc3Q7TQK4 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Exosc3Q7TQK4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Exosc3Q7TQK4 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Exosc3Q7TQK4 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Exosc3Q7TQK4 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Exosc3Q7TQK4 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Exosc3Q7TQK4 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.5□□□□□ -0.25
Exosc3Q7TQK4 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Exosc3Q7TQK4 Gm5479-201ENSMUST00000160578 435 ntBASIC13.5□□□□□ -0.25
Exosc3Q7TQK4 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.5□□□□□ -0.25
Exosc3Q7TQK4 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.5□□□□□ -0.25
Exosc3Q7TQK4 Gm27702-201ENSMUST00000184512 56 ntBASIC13.5□□□□□ -0.25
Exosc3Q7TQK4 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.5□□□□□ -0.25
Exosc3Q7TQK4 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Exosc3Q7TQK4 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Exosc3Q7TQK4 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.5□□□□□ -0.25
Exosc3Q7TQK4 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Exosc3Q7TQK4 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Exosc3Q7TQK4 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Exosc3Q7TQK4 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Exosc3Q7TQK4 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.5□□□□□ -0.25
Exosc3Q7TQK4 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.5□□□□□ -0.25
Exosc3Q7TQK4 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Exosc3Q7TQK4 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Exosc3Q7TQK4 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Exosc3Q7TQK4 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Exosc3Q7TQK4 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Exosc3Q7TQK4 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Exosc3Q7TQK4 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Exosc3Q7TQK4 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Exosc3Q7TQK4 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Exosc3Q7TQK4 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Exosc3Q7TQK4 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Exosc3Q7TQK4 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms