Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vsx2Q61412 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vsx2Q61412 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vsx2Q61412 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.34□□□□□ -0.11
Vsx2Q61412 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.34□□□□□ -0.11
Vsx2Q61412 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Vsx2Q61412 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vsx2Q61412 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vsx2Q61412 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
Vsx2Q61412 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.34□□□□□ -0.11
Vsx2Q61412 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.34□□□□□ -0.11
Vsx2Q61412 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vsx2Q61412 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.34□□□□□ -0.11
Vsx2Q61412 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vsx2Q61412 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Vsx2Q61412 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.34□□□□□ -0.11
Vsx2Q61412 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.34□□□□□ -0.11
Vsx2Q61412 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vsx2Q61412 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vsx2Q61412 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.34□□□□□ -0.11
Vsx2Q61412 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vsx2Q61412 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vsx2Q61412 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vsx2Q61412 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vsx2Q61412 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vsx2Q61412 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.34□□□□□ -0.11
Vsx2Q61412 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vsx2Q61412 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vsx2Q61412 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vsx2Q61412 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vsx2Q61412 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vsx2Q61412 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vsx2Q61412 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vsx2Q61412 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Vsx2Q61412 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vsx2Q61412 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vsx2Q61412 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vsx2Q61412 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx2Q61412 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx2Q61412 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx2Q61412 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx2Q61412 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx2Q61412 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx2Q61412 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx2Q61412 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx2Q61412 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Vsx2Q61412 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.33□□□□□ -0.12
Vsx2Q61412 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx2Q61412 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.33□□□□□ -0.12
Vsx2Q61412 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx2Q61412 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx2Q61412 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx2Q61412 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx2Q61412 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx2Q61412 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.33□□□□□ -0.12
Vsx2Q61412 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx2Q61412 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx2Q61412 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx2Q61412 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx2Q61412 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Vsx2Q61412 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx2Q61412 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Vsx2Q61412 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vsx2Q61412 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx2Q61412 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Vsx2Q61412 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx2Q61412 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Vsx2Q61412 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx2Q61412 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Vsx2Q61412 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Vsx2Q61412 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx2Q61412 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx2Q61412 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Vsx2Q61412 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx2Q61412 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx2Q61412 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx2Q61412 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.32□□□□□ -0.12
Vsx2Q61412 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx2Q61412 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx2Q61412 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Vsx2Q61412 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx2Q61412 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx2Q61412 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx2Q61412 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.32□□□□□ -0.12
Vsx2Q61412 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.32□□□□□ -0.12
Vsx2Q61412 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx2Q61412 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx2Q61412 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx2Q61412 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx2Q61412 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx2Q61412 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx2Q61412 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx2Q61412 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vsx2Q61412 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx2Q61412 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.31□□□□□ -0.12
Vsx2Q61412 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx2Q61412 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vsx2Q61412 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Vsx2Q61412 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Vsx2Q61412 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms