Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm7370-201ENSMUST00000219471 767 ntBASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 AC159205.6-201ENSMUST00000224935 887 ntBASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 Gm5417-201ENSMUST00000079706 384 ntBASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 Gm38318-201ENSMUST00000195769 1706 ntBASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav3-3Q5R1C3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-3Q5R1C3 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Gm5049-201ENSMUST00000195878 1590 ntBASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Spcs1-207ENSMUST00000228767 1008 ntBASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-3Q5R1C3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms