Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm21849-201ENSMUST00000191571 696 ntBASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Gm28678-201ENSMUST00000191593 696 ntBASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Gm20910-201ENSMUST00000193268 696 ntBASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Gm21871-201ENSMUST00000194621 696 ntBASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rc3h1Q4VGL6 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Rc3h1Q4VGL6 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Rc3h1Q4VGL6 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rc3h1Q4VGL6 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rc3h1Q4VGL6 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Rc3h1Q4VGL6 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.95■□□□□ 0.3
Rc3h1Q4VGL6 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rc3h1Q4VGL6 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rc3h1Q4VGL6 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rc3h1Q4VGL6 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Rc3h1Q4VGL6 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rc3h1Q4VGL6 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rc3h1Q4VGL6 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.95■□□□□ 0.3
Rc3h1Q4VGL6 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rc3h1Q4VGL6 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rc3h1Q4VGL6 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rc3h1Q4VGL6 Gm9719-201ENSMUST00000162765 543 ntBASIC16.95■□□□□ 0.3
Rc3h1Q4VGL6 Gm25144-201ENSMUST00000179561 110 ntBASIC16.95■□□□□ 0.3
Rc3h1Q4VGL6 Gm25352-201ENSMUST00000179815 110 ntBASIC16.95■□□□□ 0.3
Rc3h1Q4VGL6 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Rc3h1Q4VGL6 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rc3h1Q4VGL6 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rc3h1Q4VGL6 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rc3h1Q4VGL6 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.95■□□□□ 0.3
Rc3h1Q4VGL6 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rc3h1Q4VGL6 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rc3h1Q4VGL6 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rc3h1Q4VGL6 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rc3h1Q4VGL6 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rc3h1Q4VGL6 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rc3h1Q4VGL6 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.95■□□□□ 0.3
Rc3h1Q4VGL6 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rc3h1Q4VGL6 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rc3h1Q4VGL6 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rc3h1Q4VGL6 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rc3h1Q4VGL6 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rc3h1Q4VGL6 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rc3h1Q4VGL6 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rc3h1Q4VGL6 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rc3h1Q4VGL6 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rc3h1Q4VGL6 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.94■□□□□ 0.3
Rc3h1Q4VGL6 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rc3h1Q4VGL6 Gm7063-201ENSMUST00000186840 981 ntBASIC16.94■□□□□ 0.3
Rc3h1Q4VGL6 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.94■□□□□ 0.3
Rc3h1Q4VGL6 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rc3h1Q4VGL6 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rc3h1Q4VGL6 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rc3h1Q4VGL6 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rc3h1Q4VGL6 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rc3h1Q4VGL6 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rc3h1Q4VGL6 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rc3h1Q4VGL6 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rc3h1Q4VGL6 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rc3h1Q4VGL6 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rc3h1Q4VGL6 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rc3h1Q4VGL6 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Rc3h1Q4VGL6 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.93■□□□□ 0.3
Rc3h1Q4VGL6 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rc3h1Q4VGL6 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.93■□□□□ 0.3
Rc3h1Q4VGL6 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.93■□□□□ 0.3
Rc3h1Q4VGL6 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.93■□□□□ 0.3
Rc3h1Q4VGL6 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rc3h1Q4VGL6 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rc3h1Q4VGL6 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.93■□□□□ 0.3
Rc3h1Q4VGL6 Gm9063-201ENSMUST00000223299 582 ntBASIC16.93■□□□□ 0.3
Rc3h1Q4VGL6 Shd-206ENSMUST00000225145 998 ntBASIC16.93■□□□□ 0.3
Rc3h1Q4VGL6 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rc3h1Q4VGL6 Carlr-201ENSMUST00000181515 2574 ntBASIC16.93■□□□□ 0.3
Rc3h1Q4VGL6 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rc3h1Q4VGL6 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rc3h1Q4VGL6 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rc3h1Q4VGL6 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rc3h1Q4VGL6 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rc3h1Q4VGL6 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rc3h1Q4VGL6 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rc3h1Q4VGL6 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rc3h1Q4VGL6 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rc3h1Q4VGL6 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rc3h1Q4VGL6 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rc3h1Q4VGL6 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rc3h1Q4VGL6 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rc3h1Q4VGL6 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rc3h1Q4VGL6 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms