Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col5a2Q3U962 Gm6091-201ENSMUST00000098307 165 ntBASIC17.22■□□□□ 0.35
Col5a2Q3U962 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col5a2Q3U962 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col5a2Q3U962 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.22■□□□□ 0.35
Col5a2Q3U962 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Col5a2Q3U962 Gm9816-201ENSMUST00000122292 1414 ntBASIC17.22■□□□□ 0.35
Col5a2Q3U962 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col5a2Q3U962 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Col5a2Q3U962 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col5a2Q3U962 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col5a2Q3U962 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col5a2Q3U962 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC17.21■□□□□ 0.35
Col5a2Q3U962 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC17.21■□□□□ 0.35
Col5a2Q3U962 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col5a2Q3U962 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col5a2Q3U962 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col5a2Q3U962 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col5a2Q3U962 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.21■□□□□ 0.35
Col5a2Q3U962 AL645783.1-201ENSMUST00000221416 1832 ntBASIC17.21■□□□□ 0.35
Col5a2Q3U962 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col5a2Q3U962 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col5a2Q3U962 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC17.21■□□□□ 0.35
Col5a2Q3U962 Gm21470-201ENSMUST00000187680 696 ntBASIC17.21■□□□□ 0.35
Col5a2Q3U962 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC17.21■□□□□ 0.35
Col5a2Q3U962 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col5a2Q3U962 Gm18054-201ENSMUST00000207539 555 ntBASIC17.21■□□□□ 0.35
Col5a2Q3U962 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC17.21■□□□□ 0.35
Col5a2Q3U962 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col5a2Q3U962 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col5a2Q3U962 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Col5a2Q3U962 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Col5a2Q3U962 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col5a2Q3U962 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Col5a2Q3U962 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col5a2Q3U962 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col5a2Q3U962 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Col5a2Q3U962 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col5a2Q3U962 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col5a2Q3U962 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col5a2Q3U962 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col5a2Q3U962 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col5a2Q3U962 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col5a2Q3U962 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col5a2Q3U962 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col5a2Q3U962 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col5a2Q3U962 Gm6283-201ENSMUST00000182369 1000 ntBASIC17.2■□□□□ 0.34
Col5a2Q3U962 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC17.2■□□□□ 0.34
Col5a2Q3U962 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col5a2Q3U962 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col5a2Q3U962 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col5a2Q3U962 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col5a2Q3U962 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col5a2Q3U962 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col5a2Q3U962 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col5a2Q3U962 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col5a2Q3U962 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col5a2Q3U962 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Col5a2Q3U962 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
Col5a2Q3U962 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col5a2Q3U962 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col5a2Q3U962 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col5a2Q3U962 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col5a2Q3U962 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col5a2Q3U962 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col5a2Q3U962 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Col5a2Q3U962 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC17.19■□□□□ 0.34
Col5a2Q3U962 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col5a2Q3U962 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC17.19■□□□□ 0.34
Col5a2Q3U962 Gm4959-201ENSMUST00000197271 1044 ntBASIC17.19■□□□□ 0.34
Col5a2Q3U962 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC17.19■□□□□ 0.34
Col5a2Q3U962 Gm19078-201ENSMUST00000206311 727 ntBASIC17.19■□□□□ 0.34
Col5a2Q3U962 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC17.19■□□□□ 0.34
Col5a2Q3U962 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col5a2Q3U962 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col5a2Q3U962 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col5a2Q3U962 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col5a2Q3U962 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col5a2Q3U962 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col5a2Q3U962 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
Col5a2Q3U962 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col5a2Q3U962 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col5a2Q3U962 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Col5a2Q3U962 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col5a2Q3U962 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col5a2Q3U962 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
Col5a2Q3U962 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col5a2Q3U962 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Col5a2Q3U962 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Col5a2Q3U962 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC17.18■□□□□ 0.34
Col5a2Q3U962 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col5a2Q3U962 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col5a2Q3U962 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Col5a2Q3U962 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Col5a2Q3U962 Gm4804-201ENSMUST00000182234 999 ntBASIC17.18■□□□□ 0.34
Col5a2Q3U962 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC17.18■□□□□ 0.34
Col5a2Q3U962 Gm44974-201ENSMUST00000206387 1279 ntBASIC17.18■□□□□ 0.34
Col5a2Q3U962 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col5a2Q3U962 AC126253.1-201ENSMUST00000227974 824 ntBASIC17.18■□□□□ 0.34
Col5a2Q3U962 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms