Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ptchd3Q0EEE2 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptchd3Q0EEE2 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptchd3Q0EEE2 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Ptchd3Q0EEE2 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptchd3Q0EEE2 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptchd3Q0EEE2 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ptchd3Q0EEE2 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptchd3Q0EEE2 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ptchd3Q0EEE2 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptchd3Q0EEE2 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptchd3Q0EEE2 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptchd3Q0EEE2 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptchd3Q0EEE2 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptchd3Q0EEE2 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptchd3Q0EEE2 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.22□□□□□ -0.13
Ptchd3Q0EEE2 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.22□□□□□ -0.13
Ptchd3Q0EEE2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ptchd3Q0EEE2 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.22□□□□□ -0.13
Ptchd3Q0EEE2 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.22□□□□□ -0.13
Ptchd3Q0EEE2 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptchd3Q0EEE2 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptchd3Q0EEE2 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptchd3Q0EEE2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptchd3Q0EEE2 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptchd3Q0EEE2 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.22□□□□□ -0.13
Ptchd3Q0EEE2 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptchd3Q0EEE2 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptchd3Q0EEE2 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.22□□□□□ -0.13
Ptchd3Q0EEE2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ptchd3Q0EEE2 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.22□□□□□ -0.13
Ptchd3Q0EEE2 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.22□□□□□ -0.13
Ptchd3Q0EEE2 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ptchd3Q0EEE2 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ptchd3Q0EEE2 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ptchd3Q0EEE2 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Ptchd3Q0EEE2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ptchd3Q0EEE2 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ptchd3Q0EEE2 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ptchd3Q0EEE2 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ptchd3Q0EEE2 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ptchd3Q0EEE2 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ptchd3Q0EEE2 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ptchd3Q0EEE2 Acot6-202ENSMUST00000222921 3622 ntBASIC14.2□□□□□ -0.14
Ptchd3Q0EEE2 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ptchd3Q0EEE2 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ptchd3Q0EEE2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ptchd3Q0EEE2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ptchd3Q0EEE2 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ptchd3Q0EEE2 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ptchd3Q0EEE2 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.2□□□□□ -0.14
Ptchd3Q0EEE2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.2□□□□□ -0.14
Ptchd3Q0EEE2 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ptchd3Q0EEE2 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.2□□□□□ -0.14
Ptchd3Q0EEE2 Gm4535-201ENSMUST00000182274 558 ntBASIC14.2□□□□□ -0.14
Ptchd3Q0EEE2 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ptchd3Q0EEE2 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ptchd3Q0EEE2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ptchd3Q0EEE2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ptchd3Q0EEE2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ptchd3Q0EEE2 Gm10355-201ENSMUST00000097146 517 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms