Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Irf5P56477 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.46■□□□□ 0.39
Irf5P56477 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Irf5P56477 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Irf5P56477 Gm10499-201ENSMUST00000174094 934 ntBASIC17.46■□□□□ 0.39
Irf5P56477 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.46■□□□□ 0.39
Irf5P56477 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Irf5P56477 Gm45691-201ENSMUST00000206905 1120 ntBASIC17.46■□□□□ 0.39
Irf5P56477 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.46■□□□□ 0.39
Irf5P56477 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Irf5P56477 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Irf5P56477 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Irf5P56477 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Irf5P56477 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Irf5P56477 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.46■□□□□ 0.39
Irf5P56477 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Irf5P56477 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Irf5P56477 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Irf5P56477 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Irf5P56477 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Irf5P56477 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Irf5P56477 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.46■□□□□ 0.38
Irf5P56477 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Irf5P56477 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Irf5P56477 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Irf5P56477 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Irf5P56477 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Irf5P56477 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Irf5P56477 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Irf5P56477 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Irf5P56477 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Irf5P56477 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Irf5P56477 Efs-202ENSMUST00000227037 2540 ntBASIC17.45■□□□□ 0.38
Irf5P56477 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Irf5P56477 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Irf5P56477 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Irf5P56477 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.45■□□□□ 0.38
Irf5P56477 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Irf5P56477 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Irf5P56477 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Irf5P56477 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Irf5P56477 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Irf5P56477 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Irf5P56477 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.45■□□□□ 0.38
Irf5P56477 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Irf5P56477 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Irf5P56477 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Irf5P56477 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Irf5P56477 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Irf5P56477 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Irf5P56477 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.45■□□□□ 0.38
Irf5P56477 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Irf5P56477 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Irf5P56477 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC17.45■□□□□ 0.38
Irf5P56477 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Irf5P56477 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Irf5P56477 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Irf5P56477 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Irf5P56477 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Irf5P56477 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Irf5P56477 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Irf5P56477 Gm11424-201ENSMUST00000121929 829 ntBASIC17.44■□□□□ 0.38
Irf5P56477 Gm5866-201ENSMUST00000177881 973 ntBASIC17.44■□□□□ 0.38
Irf5P56477 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Irf5P56477 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.44■□□□□ 0.38
Irf5P56477 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Irf5P56477 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Irf5P56477 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Irf5P56477 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.44■□□□□ 0.38
Irf5P56477 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Irf5P56477 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Irf5P56477 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.44■□□□□ 0.38
Irf5P56477 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Irf5P56477 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Irf5P56477 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Irf5P56477 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Irf5P56477 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Irf5P56477 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Irf5P56477 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Irf5P56477 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Irf5P56477 Mypopos-202ENSMUST00000205975 2321 ntBASIC17.43■□□□□ 0.38
Irf5P56477 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Irf5P56477 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Irf5P56477 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Irf5P56477 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Irf5P56477 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Irf5P56477 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Irf5P56477 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Irf5P56477 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.43■□□□□ 0.38
Irf5P56477 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.43■□□□□ 0.38
Irf5P56477 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.43■□□□□ 0.38
Irf5P56477 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.43■□□□□ 0.38
Irf5P56477 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Irf5P56477 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Irf5P56477 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Irf5P56477 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Irf5P56477 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Irf5P56477 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Irf5P56477 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC17.43■□□□□ 0.38
Irf5P56477 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms